Gene M446_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4332 
Symbol 
ID6133215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4774197 
End bp4775258 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID641644471 
Productdiguanylate cyclase 
Protein accessionYP_001771109 
Protein GI170742454 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.338226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TGTCCCGACC CGACACGGAC CGGAGTTTCG CGATAGGCCA GCGGGCGTTG 
GAGCTCATGA AGGCCTACGG GTCTTCGGCC TGCCCGCGCA GCTACGCCGT CTGGTACACC
TACGTGTCCG GTCAGCAGCC GCTGCTCAAT GAGGCGGTGA AGCGCCTGAC GGCGGAGCAC
GGCCACCTGC GCGACGACGC GATCAGCATC CTCTACGACA CCTACATCGA TCCGCGCCGC
CACCTGATCG AGACGGAGCG CGCGGGCGCG AGCCTGCTCG GCGAGATGGA GCAGGTGCTG
GAGATGCTCG ACGTGGCGCT CGGCTCCACC GCCCGCTACG GCGCCTCGCT GCAGGCCTTC
AGCCAGGACA TCGTCGCGCC GACCGTCAAT CGCGGCCGGC TGCGGGAACT CGTGACCTCG
CTGATCGTGG CGACGCGGGA CGTCTCCGCC AACAACCGCA CCCTCGAGGC GCGGATGCGC
GAGAGCCGCG AGGAGATCCA GGCGCTGCAC GAGACCCTGG AGGCGGTGCG GGTCGAATCG
CTCACCGATC CGCTCACCGG CCTGGGCAAT CGCAAGCTGT TCGAGCAGGT GCTGCGCAAG
TCGGTGGAGG AGGCGGCCGC CAACGCGGCA CCCACCGCCC TCATCATCCT CGACATCGAC
CATTTCAAGC GGTTCAACGA CGTCTACGGC CATCTCACCG GCGACCGCGT CCTGCGCCTC
GTCGCCCTGA CGATGCGCGA GATGGTCGAC GGCCGCGCCA CCATCGCGCG CTTCGGCGGC
GAGGAATTCG GCGTGATCAT GCCCTGCGGC AGCGAGGGCG ACGCCGTCGC CCTGGCCGAG
CGCATCCGCA CGAGCGTCAT GGGCCGGGAA CTCGTCAAGC GCTCCAGCGG GGAGTCGCTC
GGTCGCGTGA CCATCTCGGT CGGCGTCGCG ACTCACCGGC CCGGCGACAC GGCCGTGTCG
CTGCTGGAGC GGGCCGATCA GTGCATGTTC GCGGCCAAGC GCAGCGGGCG CAACCGCGTC
GTCGTGGACA CGGCGGTGCC GGACCTCACG CAGGTGGCGT GA
 
Protein sequence
MSDVSRPDTD RSFAIGQRAL ELMKAYGSSA CPRSYAVWYT YVSGQQPLLN EAVKRLTAEH 
GHLRDDAISI LYDTYIDPRR HLIETERAGA SLLGEMEQVL EMLDVALGST ARYGASLQAF
SQDIVAPTVN RGRLRELVTS LIVATRDVSA NNRTLEARMR ESREEIQALH ETLEAVRVES
LTDPLTGLGN RKLFEQVLRK SVEEAAANAA PTALIILDID HFKRFNDVYG HLTGDRVLRL
VALTMREMVD GRATIARFGG EEFGVIMPCG SEGDAVALAE RIRTSVMGRE LVKRSSGESL
GRVTISVGVA THRPGDTAVS LLERADQCMF AAKRSGRNRV VVDTAVPDLT QVA