Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4238 |
Symbol | truA |
ID | 6129982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4676203 |
End bp | 4676955 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641644382 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001771021 |
Protein GI | 170742366 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00146243 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCCGCT ACAAGCTCGT GGTCGAGTAC GACGGCAGCG GCTTCGCCGG CTGGCAGCGC CAAGCCGCCG ACCGGACGGT GCAGCAGGCC CTGGAGGAGG CGATCGCGCG CTTCGCCGGC GCGCCGGTGC GGGTGCATTG CGCGGGCCGC ACCGATGCGG GCGTGCACGC CACCCACCAG GTCGTCCACC TCGACCTCGA CCGCGATTGG CGCACCGACA CGGTGCGCGA CGCGTCCAAC GCCCATCTGC GGCCGGAGCC GGTCGCGGTC GTGAGCGCGG AGCGGGTGCG CCCCGACTTC GACGCCCGCC ACTCGGCGCT GAGGCGCCAC TACCGCTACC GGATCCTGAA CCGCCGCAGC CCGCCGGCCC TCGGCCGGGC CTATCTCTGG CACGTGCCCT GGTCCCTGGA CGCGCACGCC ATGCACGCGG CGGCGCAGAC CCTGCTCGGC CGGCACGATT TCTCCGCCTT CCGGGCCGCC GAGTGCCAGG CGAACAGCCC GGTGCGCACC CTCGACCAGC TCGACGTGGC GCGGATCGGC GACGAGATCC TGGTCGCCAC CTCGGCCCGC TCCTTCCTGC ATCACCAGGT GCGCGGGATG GTCGGCACCC TGATGCTGGC CGGGTGCGGC CGGCTCGACG CCGCCGGGGT GCGGGCAGTG CTCGACTCCC GGGATCGGAC CCGCTGCGGC CCGCTCGCCC CGGCCGCCGG CCTGACCCTG ACCGGCGTCG ACTACCCGGA GCCCGGCCCG TAG
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Protein sequence | MPRYKLVVEY DGSGFAGWQR QAADRTVQQA LEEAIARFAG APVRVHCAGR TDAGVHATHQ VVHLDLDRDW RTDTVRDASN AHLRPEPVAV VSAERVRPDF DARHSALRRH YRYRILNRRS PPALGRAYLW HVPWSLDAHA MHAAAQTLLG RHDFSAFRAA ECQANSPVRT LDQLDVARIG DEILVATSAR SFLHHQVRGM VGTLMLAGCG RLDAAGVRAV LDSRDRTRCG PLAPAAGLTL TGVDYPEPGP
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