Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4065 |
Symbol | |
ID | 6130485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4534340 |
End bp | 4535524 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641644217 |
Product | integrase family protein |
Protein accession | YP_001770857 |
Protein GI | 170742202 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.438471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA TCTACCTCCG TGGGCAAACG TGGTGGGGCC GAGTCCAGAA GGACGGCAAG GACCTCCGCG CGTCCCTCGG AACACGATCT GAAGGCGTTG CTCGGCAGCG TCTTGCAATC TGGCTCGGCG AACTCGAAGC CCAAGCGTGG GGCGCCAAGC CGCGGCTGAC TCTCAACACC GTGATGGCGG AGTTCATCCG CGAGCACGGC CCGACGCTGC GCCCATCCAC GCTCCGCCGC TACGGCGTGT CCATCGCTTG GCTCGACGAG CACTTCCGCG GCAAGCTCCT CCTCGAGATC AAGCCGGCCG ACCTGCGCGC CTTCGAGACC GCGCGCCGGA CGGCGGGCGC CTCCGCGCCG ACGGTTCGGC GCGATCTCGC CTGCCTCTCG ACCATCTTCG CGTTCGCGAT CGAGAAGGAG TACGCTGACC TCAACCCGGT CACGCCCTTC ATCAGGCAGC GGGCGCGCCG CGGTCTGCGC GAGAGCCCGC CTCGCACCCG CTACTTGTCC CGGGCCGAGG AGGCGCGCCT GCTCGACGGC GCCCTGCCCT ACGTGCGCGA CGCCATCCTG TTCGCGATCT ACACGGGCCT GCGCATGGAG GAGCAATTCT CCCTCACTTG GGCGCAGGTC GACCTCGCCC GTAAGCACCT CACCATCTCG GCCGAGGCGG CGAAAGGGAA GCGCGAGCGG ACCGTGATCA TGCTGGCCCC GGCTGTCGGA GTGCTCGAGC GGATGCCGCG GCACCTGACC AGCCCCTACG TCTTCCACCA TGGCGCGGCC ACCACGACGC GGGGCGCGAC GCGGCGAGCC GCCCTCCCCC GCCCGGACCG GAACGACGGC GAGCGGTTTA ACAATCTCGA CCGCGGGCTG CGCAACGCGG CCGCACGGGC GAAGGTGCAG GACCTCCGCT GGCACGACCT GCGGCGCACC CACGGGTGCC GGCTCCTGCA GGAGGAGCGC TGGTCGATGG AGATGGTCCG CGACCAGCTC GGCCACCGAA GCGTCGTGCA GACGGAGAAG GCCTACGCGT TTCTCGAGGT GGAAGCCCGG CGCGCAGCGG CGCACGGGGC TGGCGCGGCG CCTATGGTCG ATCTCGACCC GGTCACCGGA AAGCCCCTCG TCGCACAAAA GCCGGCACAG GGGCGGCGGT TTGATCTGGA AAAACAAGCG AAATCAAAGC GCTAG
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Protein sequence | MADIYLRGQT WWGRVQKDGK DLRASLGTRS EGVARQRLAI WLGELEAQAW GAKPRLTLNT VMAEFIREHG PTLRPSTLRR YGVSIAWLDE HFRGKLLLEI KPADLRAFET ARRTAGASAP TVRRDLACLS TIFAFAIEKE YADLNPVTPF IRQRARRGLR ESPPRTRYLS RAEEARLLDG ALPYVRDAIL FAIYTGLRME EQFSLTWAQV DLARKHLTIS AEAAKGKRER TVIMLAPAVG VLERMPRHLT SPYVFHHGAA TTTRGATRRA ALPRPDRNDG ERFNNLDRGL RNAAARAKVQ DLRWHDLRRT HGCRLLQEER WSMEMVRDQL GHRSVVQTEK AYAFLEVEAR RAAAHGAGAA PMVDLDPVTG KPLVAQKPAQ GRRFDLEKQA KSKR
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