Gene M446_4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4065 
Symbol 
ID6130485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4534340 
End bp4535524 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID641644217 
Productintegrase family protein 
Protein accessionYP_001770857 
Protein GI170742202 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.438471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA TCTACCTCCG TGGGCAAACG TGGTGGGGCC GAGTCCAGAA GGACGGCAAG 
GACCTCCGCG CGTCCCTCGG AACACGATCT GAAGGCGTTG CTCGGCAGCG TCTTGCAATC
TGGCTCGGCG AACTCGAAGC CCAAGCGTGG GGCGCCAAGC CGCGGCTGAC TCTCAACACC
GTGATGGCGG AGTTCATCCG CGAGCACGGC CCGACGCTGC GCCCATCCAC GCTCCGCCGC
TACGGCGTGT CCATCGCTTG GCTCGACGAG CACTTCCGCG GCAAGCTCCT CCTCGAGATC
AAGCCGGCCG ACCTGCGCGC CTTCGAGACC GCGCGCCGGA CGGCGGGCGC CTCCGCGCCG
ACGGTTCGGC GCGATCTCGC CTGCCTCTCG ACCATCTTCG CGTTCGCGAT CGAGAAGGAG
TACGCTGACC TCAACCCGGT CACGCCCTTC ATCAGGCAGC GGGCGCGCCG CGGTCTGCGC
GAGAGCCCGC CTCGCACCCG CTACTTGTCC CGGGCCGAGG AGGCGCGCCT GCTCGACGGC
GCCCTGCCCT ACGTGCGCGA CGCCATCCTG TTCGCGATCT ACACGGGCCT GCGCATGGAG
GAGCAATTCT CCCTCACTTG GGCGCAGGTC GACCTCGCCC GTAAGCACCT CACCATCTCG
GCCGAGGCGG CGAAAGGGAA GCGCGAGCGG ACCGTGATCA TGCTGGCCCC GGCTGTCGGA
GTGCTCGAGC GGATGCCGCG GCACCTGACC AGCCCCTACG TCTTCCACCA TGGCGCGGCC
ACCACGACGC GGGGCGCGAC GCGGCGAGCC GCCCTCCCCC GCCCGGACCG GAACGACGGC
GAGCGGTTTA ACAATCTCGA CCGCGGGCTG CGCAACGCGG CCGCACGGGC GAAGGTGCAG
GACCTCCGCT GGCACGACCT GCGGCGCACC CACGGGTGCC GGCTCCTGCA GGAGGAGCGC
TGGTCGATGG AGATGGTCCG CGACCAGCTC GGCCACCGAA GCGTCGTGCA GACGGAGAAG
GCCTACGCGT TTCTCGAGGT GGAAGCCCGG CGCGCAGCGG CGCACGGGGC TGGCGCGGCG
CCTATGGTCG ATCTCGACCC GGTCACCGGA AAGCCCCTCG TCGCACAAAA GCCGGCACAG
GGGCGGCGGT TTGATCTGGA AAAACAAGCG AAATCAAAGC GCTAG
 
Protein sequence
MADIYLRGQT WWGRVQKDGK DLRASLGTRS EGVARQRLAI WLGELEAQAW GAKPRLTLNT 
VMAEFIREHG PTLRPSTLRR YGVSIAWLDE HFRGKLLLEI KPADLRAFET ARRTAGASAP
TVRRDLACLS TIFAFAIEKE YADLNPVTPF IRQRARRGLR ESPPRTRYLS RAEEARLLDG
ALPYVRDAIL FAIYTGLRME EQFSLTWAQV DLARKHLTIS AEAAKGKRER TVIMLAPAVG
VLERMPRHLT SPYVFHHGAA TTTRGATRRA ALPRPDRNDG ERFNNLDRGL RNAAARAKVQ
DLRWHDLRRT HGCRLLQEER WSMEMVRDQL GHRSVVQTEK AYAFLEVEAR RAAAHGAGAA
PMVDLDPVTG KPLVAQKPAQ GRRFDLEKQA KSKR