| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3862 |
|---|
| Symbol | |
|---|
| ID | 6134239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4309992 |
|---|
| End bp | 4311038 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641644027 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001770669 |
|---|
| Protein GI | 170742014 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACA GACGCATCCT CCTCCAGGGG CTGACCGGTG CCGCCTTCGC CGGAGGCGTG
GCGCCGGCCG CCGCACAGGG GCGGCCCTTC ACCTTCTGCT CCTTCGGCGG CGCCATCGGC
ACCGTGTTCA AGACCGCCTT CATGGATCCG GCCGCACGGA AGTTCGGCAT CCGCATCGCC
AACACCTCTC CCACCAATTA CGCCAAGCTC AAGGCGATGG TCGAGGCCAA GGCCGTCGAG
TGGGATCTGG TCGATACCGG CGGCCAATTC ATCTTCCAGG GCCGCGACCA GGGCCTGCTG
GAGAAACTCG ACTACTCGAT CATCGACGCG TCCCGGCTCG ATCGCGCCTG GGTCACCGAC
TATGGCATCT ACGTCCTGGT CGGGGCGACC GTGATGGCCT ACAACACGAA GCAGATGCCG
GCCGGCGCCA CTCCGAACAC CTGGAAGGAT TTCTGGGATG TGAAGAGCTT CCCGGGTCCT
CGGACGCTCT ACACACGATT CTATTACAAT TACGAGGCGG CCCTGCTGGC CGCGGGGGTG
CCGCGCGGCG AGGTCTACCC GGCGACCGAG GACAAGATCA AGCTCGCCTT AGAGAAGCTG
CGCGAGATCA AGCCGCACGT GAAGGTCTGG TGGACGACGG GCGCGCAGCC GGCCCAGCTC
GTCTCGACCG GCGAGGTGGC AATGGCGCTG GTCTGGAGCG GACGGGTGCT CGACGTCATC
AAGGAGGGCG CGCCGGTCGC CTTCACGTAC GAGGACTCGA TCGCCTGGGG CGAGGCGTTC
GTGGTGCCCA AGGGCGCCCC GAACGCCGAG ACGGCGATGA GGGTCATCAA CTACGCGATC
TCCGAGGAGG CCCAGGAGGC CCTCCTGCCG CTCGGCGTCT ACGGGCCCGT GCTGAAGAGC
GCGGCCGCCA AGGCGACCCC GGACCAAGCC AAGGCCTACG TCAGCTATCC GGCCAACCTC
GCGCAGGCCT GCATCTTCAA CGACGAGGAA GTGGCGCGCT ACGCGACCCG GTACGAACAG
GAGTGGCAGA AGTTCCTGCT GTCCTGA
|
|---|
| Protein sequence | MLNRRILLQG LTGAAFAGGV APAAAQGRPF TFCSFGGAIG TVFKTAFMDP AARKFGIRIA
NTSPTNYAKL KAMVEAKAVE WDLVDTGGQF IFQGRDQGLL EKLDYSIIDA SRLDRAWVTD
YGIYVLVGAT VMAYNTKQMP AGATPNTWKD FWDVKSFPGP RTLYTRFYYN YEAALLAAGV
PRGEVYPATE DKIKLALEKL REIKPHVKVW WTTGAQPAQL VSTGEVAMAL VWSGRVLDVI
KEGAPVAFTY EDSIAWGEAF VVPKGAPNAE TAMRVINYAI SEEAQEALLP LGVYGPVLKS
AAAKATPDQA KAYVSYPANL AQACIFNDEE VARYATRYEQ EWQKFLLS
|
|---|
| |