| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3562 |
|---|
| Symbol | |
|---|
| ID | 6134428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3979425 |
|---|
| End bp | 3980486 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641643729 |
|---|
| Product | plasmid partitioning protein RepB |
|---|
| Protein accession | YP_001770377 |
|---|
| Protein GI | 170741722 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.277988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.146298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGA AATCGAACCT CGACGCGCTG TTCGCCGCCA AGCCCGTGCA CAAGCCCGTG
CACTTGCCGG CGCCCCTGCC CGCGCCCTCG CCCGAGCCGG ACGGGTTTGC AGCTGCAAAC
CAGACCCCGG ACGGGACCGA GTTTGCAGCT GCAAACCCGC CGGCCGCGCC GCGGCGCCGC
AGCGGCGCCA TCGGGGCGAT GAGCCAGACC CTGCGGGGGC TGGCCGCCCA GGCCGACGCC
GCCGCGAGCC TCGAAGCCGG CTCGGCCGTG GTCGAGATCG AGCCCGGGCT GATCGACGCC
TCCTTCATCG CCGACCGGGT CGCCGACCCG ACCGACCCGA GCCTCGCGAG CCTCGTCGAG
AGCGTGCGCG AGAGCGGCCA GCAGGTGCCG GTCCTGGTGC GGCCGCACCC GGTCAGCGCC
GGCCGCTACC AGATCGCCTA CGGGCGCCGC CGCGTGCGGG CGGCGCAGAT CCTGGCCCGG
CCGGTGCGGG CCGTGATCCG GCCGCTCACC GATGCCGAAC TCGTTATCGC CCAGGGCAAG
GAGAACCTGG AGCGGCGCGA CCTGAGCTAT ATCGAGCGGG CCTTCTTCGC CCGGCGGCTG
GAGGAGCACG GCTTCCCGCG CGACACGATC ACGGCGGCGA TGGGGGTCGG CAAGGGCGAC
CTCTCGACCC TGATCTCGGT CGCCCGCACG GTGCCGGATG ACATTCTGGC GGCGATCGGC
CCGGCCCCGG CCGCCGGTCG GCCGCGCTGG ATGCTGCTCG CCGAGGGGAT CCGGACGGCG
GACCGCGCCG CCCTCTCGGC CCTGCTCGCC GATCCGGCCT TCCGGGCGAA GCCGACCGAC
CAGCGCTTCG CCGCGATCCT GGCCGCGGTC GCGGCACCGC CGGCGCGGGG CGGGCGGCCC
CAGGTCTGGA CGGACCCGCA GGGCCGCAGG CTCGCCCGCG TCGAGCGCGG CGCCGACCGC
GTCGCGCTCT CCTTCGACGA GCGCCTTGAG CCGGGCCTCG CGGACTACAT CCTTGACCAG
CTTCCCGAGA TCCTGGCCGC CTACCGCCGG TCCAGAAGCT GA
|
|---|
| Protein sequence | MSRKSNLDAL FAAKPVHKPV HLPAPLPAPS PEPDGFAAAN QTPDGTEFAA ANPPAAPRRR
SGAIGAMSQT LRGLAAQADA AASLEAGSAV VEIEPGLIDA SFIADRVADP TDPSLASLVE
SVRESGQQVP VLVRPHPVSA GRYQIAYGRR RVRAAQILAR PVRAVIRPLT DAELVIAQGK
ENLERRDLSY IERAFFARRL EEHGFPRDTI TAAMGVGKGD LSTLISVART VPDDILAAIG
PAPAAGRPRW MLLAEGIRTA DRAALSALLA DPAFRAKPTD QRFAAILAAV AAPPARGGRP
QVWTDPQGRR LARVERGADR VALSFDERLE PGLADYILDQ LPEILAAYRR SRS
|
|---|
| |