Gene M446_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3466 
Symbol 
ID6132851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3850569 
End bp3854657 
Gene Length4089 bp 
Protein Length1362 aa 
Translation table11 
GC content75% 
IMG OID641643633 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001770285 
Protein GI170741630 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.474676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGGC GGCGGCCACG GCCCTTGTCT TACTCCATCG TGGCCCTGAC GCTCGTGCTG 
CTGATCCCGA GCGTCGCGAT CTCGGGCCTG CTGGCATGGC GCTGGGTCGC GGCCGAGCAG
CAGCGCCTGG AGAGCGCCAC GGTCGCGATC AACGCCTACG CGGTCGCGCA GGTCGACCGC
TTCCTGTCCG GGCAGATCGC GATGCTGCAG GCGCTGGCGA CCTCGCCCGC CCTCGACACC
GGCGACCTCG CGCGCTTCGA TGCGCAGGCG CGCGAACTCG TGACCCTGCA GGGCGTCAAC
ATCATCCTGC GCGGCCGCGA CGGCCAGCAG CTGATCAACA CGCGCCTGCC CTACGGCACG
GCGCTGCCGA ACCTGCTGCG CGACATCGAC CGGAACGTGC TCGAATCGGG CAAGCCCACC
GTCTCGGACC TGTTCGTCGG GGCGGTCTCC GGCGAGCCCA TGATCCGCGT CGGCGTCCCG
GTGACCCGCG GCGGGCGGAT CGCCTACCTG CTGAGCGCGA GCTACAGCGC CGCGCTGTTC
GGCCAGCTCC TCGCCGATGC GGGCGTCGCC GCCCCGTATT CCGGCTCGAT CACGGACCGC
ACCGGCACCA TCATCGGGCG GTCGGTCGAC AGCGCCAACG CCACCGGCAG GCCGCTCCCG
GGCTTCGCCG CCGTGAAGGG CCAGCGGGGC ACGTGGTCGG GGCGCAACCT GCTCGGGGTT
CCGGTCTTCG CCACCTACCA GCGCTCCGGC GTGGCGGGCT GGCTCGTCAG CATCGGCATC
GAGCGCTCGG CCCTCCAGGA GCCGCTCACC GATTCGCTCT CCGTGCTGGT CCCGATCATC
GCGGCGCTGA TGTTCGTCGC CCTCGTCGCC TCGGCCATGG TGGGCCGGCG CATCGTGGCG
GCCCAGCATC GCTTGGCGGA GGCGGCGCGG GCCCTCGGGT CCGGGGAGGC GATCCCCGTC
CCGCGCTCCT CCTTCAGCGA GGTCGACGAG GTCGGCGCGG CCCTCGCCGT CGCCTCCGCG
CGCCTGCGCG ACCAGGCGGA TGCCCTGCGC GCCATCAACC GCGACCTCGA ACAGATGGTG
GAGCGCCGCA CCCGGGAGGT GGCCGCCCAG CAGGTTCTGC TCAGCACCAC CCTCGACGCC
ATGGACCAGG GCCTCGTCAT GATCGACGGC CGCGGCACCG TCGCGGTGGC CAACCGGCGC
GCGGCGGAAC TCCTCGGCCT CGCCTCCGAC GCGCTGGTGG GCGCGCCGCA CGCCCGCGTG
CCGGACCTCC TGCGGGCCGC CTGGAGCGAG GCGGAGCCGG GCGGGGCGCA TGCCGGCCCG
GCGCCCCTCG CGGAGCGCAC CCTCCCGGAC GGCAGGGTGC TGGAGATCCG CAGCACCTGG
CTCCCCGAGG GCGGCGTGGT CTGCACCTGC ACGGACGTGA CCGCCCGGCG CAGCGCCGAG
GCCGCCCTGC ACGAGAAGAC CGCCCTCCTC GACGCCACCC TGGCGCATAT GGACCAGGGC
GTGCTGGTGA TCGACCAGGA CGGCATCGTC CAGCTGTGCA ACGAGCGCGC CCTGGCGCTC
CTCGACCTCC CGGCGGCCTT CGCCACCGAG AAGCCGAGCT TCGCGGCCCT GGTCGCCTAC
CAGCAGCGCA CCGGCGAGTT CAGCGGGGCC ACCGAGGATC ACGACCCCTG GCTCAAGCTC
AAGGGGGACC TGCTCGGCGC CCCGAAGGTC TACGAGCGCT CCCGCCCGAA CGGGACGGTG
ATCGAGGTGC GCACCGTGCG CCTCGCCTCG GGCGGCGCCA TCCGCACCTT CTCGGACGTC
ACCGCCCACC GGCAGCGCGA GCGCGCCATC GGCCTCAGCG AGGCGCGCTA CCGCGCCCTC
GCCGAGGCCC TGCCGCAGCT CGTCTGGACG GTGCGGCCCG ACACCCGCGA GGCCCTCTAC
CGCAACGCCC AGTTCGACCG CTATTACGGA CCGATCTCGA ACGCCGTCGC CGACCGGCTC
GCCCACAACC ACCCGGCCGA CAGCGCCCGC ATGGCCGAGG CCTGGGCGCG GGCCGAGCGG
GCGAGCGAGC CCCTCACGGT CGAGGGCCGC CTGCGCCGCC ACGACGGCGT CTACCGCTGG
CACCGGCTGG TGATGGTGCC GCTCCTGACC CAGGGCGTCA TCACCGAGTG GCTCGGCACC
GCCCTCGACA TCGACGACAT CATCACGGCC CAGGAGCAGG TCCGCCAGTC CAAGGACCTG
CTGCAGCTCG CCCAGACGGC GGCCGGCGCC GGCGTCTGGG AATGGGACAT GCAGGCGGGC
CTCGTGCTGC TGTCGCGCGT CAGCGCCCGC CGCTACGGGC TGGAGGTGGA CGCGGCCGAC
GCGGTCGTCA CGCTCACCTC GCAGGAATGG ACCCGGCTCC TCCATCCCGA GGATGCCGGG
AGGGTCTGGG AGGCCGTGCA CGAGGCGGTC GCGACCCGGC AGAACTACGC GGTGACCTTC
CGGCCCGCCG CGCGCGGCGG CGGCGGCGCG GTCGAGTGCT GGATCGAGGG CCACGGGCGG
ATCATGCGCA ACGGCAGCGG CGCCCCGGTC CGGATCGTCG GCCTCGACTT CGACGTCACC
CCGCGCATGC GGGCCGAGCG GGCCCTGAAA CAGGCGACGC GGCTCGCCGA GCAGGCGCGC
GAGGAGGCGG AGGCGGCCAG CACCGCCAAG TCCGAGTTCC TCGCCATGAT GAGCCACGAG
ATCCGCACGC CCCTGCACGG CATCCTGGGC TACGCGGACC TGCTCACCGA GTGCGGGCTC
CTCGCGGCCG AGCAGCAGCG GCAGGTCGAG CACATCCGCA CGGCCGGGCG GGCGCTGCTC
GCGGTGGTGA ACGACGTCCT CGACTTCTCG GCCATCGAGG CGGGCCGGGT CGCCCTCGAT
CCGCGGCCCT TCGCGCTGCG CGCCCTGATC GGCGAGGTGG TGGCGATCGT GCGCGAGCCG
GCCGAGCGCA AGGGCCTGAC GCTCGCCGCC GAGATCGACC CGGCCGTGCC GGACTGGCTG
GTCGGGGACC AGGGCCGCGT CCGCCAGGTG CTCCTCAACC TCGCGGCCAA TGCCCAGAAA
TTCTGCCACG CCGGCTCGGT GACGCTCTCG GTCGCGCCGG ACCGGATCGC CGCGGAGGCG
CTGACGGTGC GCTTCGCGGT GCGCGACACC GGGGTCGGGA TCGAGGAGGA CAAGCTCGGG
CGCCTCTTCC AGCGCTTCAG CCAGGCGGAC GGCTCGATCC GGCGCGAATT TGGGGGGACG
GGCCTCGGCC TCGCGATCTC GAAGGCGCTC GTCGAGGCGA TGGGCGGGCG GATCGGCGTC
GAGAGCGTGC CGGGCCGCGG GTCGACCTTC TGGTTCACGC TGCGGCTCCT GCGCGCCGCG
CCGCCCCTGC CGCTCGCCCC GGAGCGCGAC CCGAAGCTGG CCCGGCCCGC CCGCATCCTC
CTGGCGGACG ACAGCGACAT CAACCGCGAC ATCGCCAGCC GCGTGCTGGA GGCGGCCGGG
CACGCGGTGG TGGCGGTGCC CCACGGCGAG GCCGCGGTCG AGGCCACGGC GGCCGGCGGC
TTCGACATCG TGCTGATGGA CGTGCAGATG CCGGTGGTCG ACGGCCTGAC CGCGACGCGG
CGGATCCGCA CGCTGAGCGG GGCGGCGGGC CGGCTGCCGA TCATCGCCAT GACGGCGAAC
GTGCTGCCCT CGCAGATCGC GGAGTTCCGG GCCGCCGGGA TGGACGATCA CATCGGCAAG
CCGTTCCGGC AGAAGGACCT TCTCGCCGTG GTGCAGCGCT GGACCGGGGC GGGGGGCGCC
TCCCCGGAGC CGGTCTCCGC CGGCGAGGCC GGGCGGCTCG GTCCCGACGC GCTGCGGGCC
CTGCGGGCGC GGCTGGCGGC GGACCTGCGC TCGCGGTTCT CGCCGGACCT CGCCCATGAC
CGGCTGGCCC GGGAGGCGCA CGAGATCGTC TCGCTCGCGG GCCTGCTCGG CTTCCCGGCG
CTCGCCGAGG TCTGCCGCGA GGTCGAGCGC GCCTGCGACG CGCGCCGGGA CCTCGACGAC
GTCCTGGCGC GGCTGATGCA GGCGCGCGAC GCCACCCTGG CGGAGATCGA GCGGGCCCAG
GTCGCCTGA
 
Protein sequence
MAGRRPRPLS YSIVALTLVL LIPSVAISGL LAWRWVAAEQ QRLESATVAI NAYAVAQVDR 
FLSGQIAMLQ ALATSPALDT GDLARFDAQA RELVTLQGVN IILRGRDGQQ LINTRLPYGT
ALPNLLRDID RNVLESGKPT VSDLFVGAVS GEPMIRVGVP VTRGGRIAYL LSASYSAALF
GQLLADAGVA APYSGSITDR TGTIIGRSVD SANATGRPLP GFAAVKGQRG TWSGRNLLGV
PVFATYQRSG VAGWLVSIGI ERSALQEPLT DSLSVLVPII AALMFVALVA SAMVGRRIVA
AQHRLAEAAR ALGSGEAIPV PRSSFSEVDE VGAALAVASA RLRDQADALR AINRDLEQMV
ERRTREVAAQ QVLLSTTLDA MDQGLVMIDG RGTVAVANRR AAELLGLASD ALVGAPHARV
PDLLRAAWSE AEPGGAHAGP APLAERTLPD GRVLEIRSTW LPEGGVVCTC TDVTARRSAE
AALHEKTALL DATLAHMDQG VLVIDQDGIV QLCNERALAL LDLPAAFATE KPSFAALVAY
QQRTGEFSGA TEDHDPWLKL KGDLLGAPKV YERSRPNGTV IEVRTVRLAS GGAIRTFSDV
TAHRQRERAI GLSEARYRAL AEALPQLVWT VRPDTREALY RNAQFDRYYG PISNAVADRL
AHNHPADSAR MAEAWARAER ASEPLTVEGR LRRHDGVYRW HRLVMVPLLT QGVITEWLGT
ALDIDDIITA QEQVRQSKDL LQLAQTAAGA GVWEWDMQAG LVLLSRVSAR RYGLEVDAAD
AVVTLTSQEW TRLLHPEDAG RVWEAVHEAV ATRQNYAVTF RPAARGGGGA VECWIEGHGR
IMRNGSGAPV RIVGLDFDVT PRMRAERALK QATRLAEQAR EEAEAASTAK SEFLAMMSHE
IRTPLHGILG YADLLTECGL LAAEQQRQVE HIRTAGRALL AVVNDVLDFS AIEAGRVALD
PRPFALRALI GEVVAIVREP AERKGLTLAA EIDPAVPDWL VGDQGRVRQV LLNLAANAQK
FCHAGSVTLS VAPDRIAAEA LTVRFAVRDT GVGIEEDKLG RLFQRFSQAD GSIRREFGGT
GLGLAISKAL VEAMGGRIGV ESVPGRGSTF WFTLRLLRAA PPLPLAPERD PKLARPARIL
LADDSDINRD IASRVLEAAG HAVVAVPHGE AAVEATAAGG FDIVLMDVQM PVVDGLTATR
RIRTLSGAAG RLPIIAMTAN VLPSQIAEFR AAGMDDHIGK PFRQKDLLAV VQRWTGAGGA
SPEPVSAGEA GRLGPDALRA LRARLAADLR SRFSPDLAHD RLAREAHEIV SLAGLLGFPA
LAEVCREVER ACDARRDLDD VLARLMQARD ATLAEIERAQ VA