Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2262 |
Symbol | |
ID | 6129259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2519886 |
End bp | 2520614 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641642488 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001769156 |
Protein GI | 170740501 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00533118 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACGTG GTCGTGATTT TAGGGAGCCG CGTCGTCGCG GCTTCGATGA TGGTGCGCCT GAGCCGCGGT GGCCGGATCA GGTTCCGTCA GGGGGATACG GTGGCGGTGG CTATGGCGGC GGCTTCGGCG GCGGTGGGTT CGACCGCGGT CCGGCCCGCA GCAGCATTCC CTCCGGGCCG GAGCGTGACG CGACGGTCAA GTGGTTCAAC AAGGAGAAGG GCTTCGGCTT CGTCGAACTG GGTGACGGTT CGGGCGATGC CTTCCTCCAC ATCCGCGCCG TCGAGGCGGC CGGCCATGCG GATCTGCTGC CCGGCACGCG CCTGACCGTC CAGACGGCTC AGGGGCAGAA GGGCCCGCAG GTCACCAACA TCACCAGCGT CGACACCAGC ACGGCCGAGG CCCCGGCGGC CCGCGGGCCG CGTCCGCCCC GCGCGGGCGG CTTCGGCGGC GGCGGTGGCG GCTACGGCGC TGGCGGCGGT GGCGGCGGCG GTGGCGGGCG CTTCGCGAGC GGCCCCTCCA CCGAGATGAG CGGCACCGTG AAGTGGTACG ACCCGGCCAA GGGCTTCGGC TTCGTGTCGG TGAAGGACGG CGGCAAGGAC GTCTTCGTTC ACCGCTCGGC GCTCGCCCGC GCCGGCCTCG ACTCCCTGGC CGAGGGCCAG CAGGTGACGA TGGGCGTGGT CGAGGGCCAG AAGGGCCGCG AGGCGCAGAG CATCACCGTC GCGGAGTGA
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Protein sequence | MGRGRDFREP RRRGFDDGAP EPRWPDQVPS GGYGGGGYGG GFGGGGFDRG PARSSIPSGP ERDATVKWFN KEKGFGFVEL GDGSGDAFLH IRAVEAAGHA DLLPGTRLTV QTAQGQKGPQ VTNITSVDTS TAEAPAARGP RPPRAGGFGG GGGGYGAGGG GGGGGGRFAS GPSTEMSGTV KWYDPAKGFG FVSVKDGGKD VFVHRSALAR AGLDSLAEGQ QVTMGVVEGQ KGREAQSITV AE
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