Gene M446_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1939 
Symbol 
ID6135828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2166396 
End bp2166998 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content73% 
IMG OID641642174 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001768842 
Protein GI170740187 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCT TCACGACCCT CACGGCGGTG GCGATCCCTC TCGGCGTCGC CAACGTCGAC 
ACCGACCAGA TCCTTCCCGC CCGCTTCCTC AAGAAGCCGC GCAGCGCCGG CTACGGCGCC
TTCCTGTTCC ACGACGAGCG TCGCCGGGGC GACGCGATGC TCCTCGACGC GCCCGCCTAC
GCGGGCGCCG GGATCCTGGT CGCGGGTCGC AATTTCGGCT GCGGCTCCAG TCGCGAGGGT
GCGGTCTACG CCCTCGTGGA CGGCGGCATC CGCTGCGTGA TCGCCCCGAG CTTCGGCGAC
ATCTTCGCCT CGAATGCCGC CAAGAACGGC CTCCTCACCG TCGCGCTGCC GGAGGAGGTC
GCGGCGGCGC TGAGGGCGCG CCTCGCCGCC GCCCCGGGCG CGACGCTCAC GGTCGACCTG
CCGGCCGAGC GCATCACCGA TCCCGACGGT GCCGTGATCC CCTTCGCGAT CGACCCGTTC
CGCAAGCGCT GCCTCGTCGA GGGGCTGGAC GACATCGACC TGACCCTGGC GCACGCGGCG
GCGATCGACG CCTACGACGC GCGGGCAGAG CGCGAGACGC CGTGGCGGAT CCCGCCGATG
TAG
 
Protein sequence
MQPFTTLTAV AIPLGVANVD TDQILPARFL KKPRSAGYGA FLFHDERRRG DAMLLDAPAY 
AGAGILVAGR NFGCGSSREG AVYALVDGGI RCVIAPSFGD IFASNAAKNG LLTVALPEEV
AAALRARLAA APGATLTVDL PAERITDPDG AVIPFAIDPF RKRCLVEGLD DIDLTLAHAA
AIDAYDARAE RETPWRIPPM