Gene M446_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1938 
Symbol 
ID6135827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2164987 
End bp2166393 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content75% 
IMG OID641642173 
Product3-isopropylmalate dehydratase, large subunit 
Protein accessionYP_001768841 
Protein GI170740186 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CGCCCCGCAC CCTGTTCGAC AAGGTCTGGG ACGCGCACGT GATGGCCGCG 
CGCCCGGACG GGCAGGCCCT GCTCGCCATC GACCGGCACC TGCTGCACGA GGGCTCGTTC
CACGCCTTCG GGATGATCGA CCATGCCGGG CGGGCGGTGC GCCGGCCCGA CCTGACCTTC
GCGATCGCCG ACCATTACGT GCCCTCGCGC GGGCGCGACC GCCCGATTCC CGATCCCGAG
ATCGCCGCCA TGGTGTCGGG CCTCGCCGAG AACGCGGCCC GCCACGGCAT CCGCCACTTC
GGCCTCGACG ATCCGGGCCA GGGCATCGTG CACGTGCTCG CCCCCGAGCA GGGCCTGACC
CTGCCGGGCC TCACGATCGT GTGCGGGGAT TCCCACACCT CGACCCACGG GGCCTTCGGG
GCGCTCGGCT TCGGGATCGG GGCGACCGAG GTCGCGCACG TGCTGGCCAC CCAGGCGCTC
TGGCAGCGCC GGCCCAAGAC CCTGCGCGTG ACCATCGACG GGACGCTCGG CGTCCACGTC
ACCGCCAAGG ACGTCATCCT GGCCATCATC GGCCGCATCG GGGCGGGCGG CGCGGTCGGG
CACGTGCTCG AATACGCCGG CAGCGCGATC CGCGCCCTGT CGATGGAGGG GCGGCTGACC
ATCTGCAACA TGTCGATCGA GGCGGGTGCG CGCGCCGGGA TGGTCGCCCC GGACGACACG
ACCTTCGCGT TCCTCGACGG GCGGCCCTTC GCGCCGAAGG GCGAGACCTT CGCGCGGGCC
GTGGCGGCGT GGCGGCGCCT GCCGAGCGAT CCCGGCGCGC GCTTCGACCG CGAGGAGAGC
CTCGAGGCGG GCGCCATCGC CCCGACCGTC ACCTGGGGCA CCAGCCCCGA GACGGCGGTG
CCGGTGACCG GCACCGTGCC CGATCCGGCG GCCGAGTCCG ATCTCGGCCG CGCCGGCCAG
ATGCGGGCGA TGCTCGACTA CATGGCGCTC GCGCCCGGGA CGCCCCTCGA AGCGGTGACC
ATCGACCGGG TGTTCATCGG CTCCTGCACC AATGCGCGCA TCGAGGACCT GCGCGCCGCG
GCCAGCGTGC TGCGCGGCCG GCGCGCGGCG GTGCCGGGCC TCGTGGTGCC CGGCTCCGGC
CCCGTGCGCC GGCAGGCGGA GGCCGAAGGG CTCGACGCGG TGTTCCGGGA GGCCGGCCTC
GAATGGGGCG AGCCGGGCTG CTCGATGTGC GTCGGCATCA ACGGCGACCT CGTGCCGCCG
GGCGAGCGAT GCGCCTCGAC CACCAACCGC AACTTCCCGG GCCGCCAGGG CCCGAACGCG
CGCACCCACC TGATGAGCCC GGCCATGGCG GCCGCCGCGG CCCTGACCGG CCGCCTCACC
GACGTCCGCC GCCTCGGAGC GCCCTGA
 
Protein sequence
MTQTPRTLFD KVWDAHVMAA RPDGQALLAI DRHLLHEGSF HAFGMIDHAG RAVRRPDLTF 
AIADHYVPSR GRDRPIPDPE IAAMVSGLAE NAARHGIRHF GLDDPGQGIV HVLAPEQGLT
LPGLTIVCGD SHTSTHGAFG ALGFGIGATE VAHVLATQAL WQRRPKTLRV TIDGTLGVHV
TAKDVILAII GRIGAGGAVG HVLEYAGSAI RALSMEGRLT ICNMSIEAGA RAGMVAPDDT
TFAFLDGRPF APKGETFARA VAAWRRLPSD PGARFDREES LEAGAIAPTV TWGTSPETAV
PVTGTVPDPA AESDLGRAGQ MRAMLDYMAL APGTPLEAVT IDRVFIGSCT NARIEDLRAA
ASVLRGRRAA VPGLVVPGSG PVRRQAEAEG LDAVFREAGL EWGEPGCSMC VGINGDLVPP
GERCASTTNR NFPGRQGPNA RTHLMSPAMA AAAALTGRLT DVRRLGAP