Gene M446_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1927 
Symbol 
ID6134167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2152343 
End bp2153563 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content73% 
IMG OID641642162 
Productextracellular ligand-binding receptor 
Protein accessionYP_001768830 
Protein GI170740175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.195593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGT CCGATCGCGT CCCGAACCGC CGCCGCGTGC TCACGGGCGG CGCGGCCGCC 
GCCTCGCTCC TCGCGATGCC GGCGGTGCTG CGGGCCGAGC CCGCGCCGGT GAAGATCGGC
ATCCTCCAGC CGCTCACCGG GGCGCTCGCC GGCGACGGCG ACCTCGGCCG CCTCGGGGCG
GAACTCGCGG TGGCAGACCT CAACGCCGCG GGCGGCCTCA AGGCGCTGGG CGGCGCCCGG
ATCGAGGCGG TGATCGCCGA CAACCGCTCG AACCCGGAAG CCGCCGCCCA GGAGGCCGAG
CGCCTCGCGG GCGAGGGCGT CGCCGCGATC GTGGGCGGCT TCGGCAGCGG CCTGTGCGCC
ACCGCCAGCC AGGCGGCGGC CCGCTACGAC CTGCCCTACC TGATCGATGT CGGCGTCGCC
GATTCGCTCA CGCAGCGCGG CCTCAGGAAC ACCTTCCGGT TCTCCCCGAG CTTCAGCATG
GTCACGACGA GCGCCCTGGA GCGCCTCGTC GCCCTCAATG ACGGGGCCGG CAAGCCCGCC
CGCACGGTGG TGATCGTGCA CGAGGACGGG CTGTTCGGCT CGGGCCTCGC CAAGCTGCTC
CAGGCCGAGC TGCCCAAGCG CGGCTTCGAG ATCCTGGAGA CGATCGCCCA TCCGACTCCG
GCCCGCGACA TGGCCAACGT CGTGCTGCGC ATCCGCTCGC TGCAGCCCGA CCTCGTCGTT
CCGTCGAACT ACTACGGCGA GTTCGTTCTC CTCGCCCGCA CCCTGCAGCA GCAGCGCGTC
CGCCCCAAGG GCATCTACGC CATCCTCGGC GGCGGCGCGT CGAGCCTCCG CTTCGTCAAG
GAGTTCCCTC AGGCCGCCGA GGGGGTGATG GATTGCAACC ACTGGCCCGA TCCGAAGAAC
CCGGCCGCGG CCGAACTGCG CCGACGGACC GAGGCGGCCG GCCGCGCCTT CGCCTACAAC
GTGCCGATGA ACTACTCGGC CGTGCGGCTG ATGGCCGAGG CGATCGAGAA GGCCGGCGCC
CCCGACCGCG CCCGGATCAT CGAGGCGCTG GCCACGCAGA GCTTCGGCAG CGGCGTGATG
CCCTACGGCC AGTCGCGCTT CGCCGGCGGC CAGAACGCCA GCGCGCTGCC CCTCAACACG
CAGGTCCAGG GCGGCGACGT CAAGGTGATC GCCCCGGACG GCTTCGCCGA GGCCAAGCCG
AACTTTCCCC TGAGGGCCTG A
 
Protein sequence
MIASDRVPNR RRVLTGGAAA ASLLAMPAVL RAEPAPVKIG ILQPLTGALA GDGDLGRLGA 
ELAVADLNAA GGLKALGGAR IEAVIADNRS NPEAAAQEAE RLAGEGVAAI VGGFGSGLCA
TASQAAARYD LPYLIDVGVA DSLTQRGLRN TFRFSPSFSM VTTSALERLV ALNDGAGKPA
RTVVIVHEDG LFGSGLAKLL QAELPKRGFE ILETIAHPTP ARDMANVVLR IRSLQPDLVV
PSNYYGEFVL LARTLQQQRV RPKGIYAILG GGASSLRFVK EFPQAAEGVM DCNHWPDPKN
PAAAELRRRT EAAGRAFAYN VPMNYSAVRL MAEAIEKAGA PDRARIIEAL ATQSFGSGVM
PYGQSRFAGG QNASALPLNT QVQGGDVKVI APDGFAEAKP NFPLRA