Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1927 |
Symbol | |
ID | 6134167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 2152343 |
End bp | 2153563 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641642162 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001768830 |
Protein GI | 170740175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.195593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCGT CCGATCGCGT CCCGAACCGC CGCCGCGTGC TCACGGGCGG CGCGGCCGCC GCCTCGCTCC TCGCGATGCC GGCGGTGCTG CGGGCCGAGC CCGCGCCGGT GAAGATCGGC ATCCTCCAGC CGCTCACCGG GGCGCTCGCC GGCGACGGCG ACCTCGGCCG CCTCGGGGCG GAACTCGCGG TGGCAGACCT CAACGCCGCG GGCGGCCTCA AGGCGCTGGG CGGCGCCCGG ATCGAGGCGG TGATCGCCGA CAACCGCTCG AACCCGGAAG CCGCCGCCCA GGAGGCCGAG CGCCTCGCGG GCGAGGGCGT CGCCGCGATC GTGGGCGGCT TCGGCAGCGG CCTGTGCGCC ACCGCCAGCC AGGCGGCGGC CCGCTACGAC CTGCCCTACC TGATCGATGT CGGCGTCGCC GATTCGCTCA CGCAGCGCGG CCTCAGGAAC ACCTTCCGGT TCTCCCCGAG CTTCAGCATG GTCACGACGA GCGCCCTGGA GCGCCTCGTC GCCCTCAATG ACGGGGCCGG CAAGCCCGCC CGCACGGTGG TGATCGTGCA CGAGGACGGG CTGTTCGGCT CGGGCCTCGC CAAGCTGCTC CAGGCCGAGC TGCCCAAGCG CGGCTTCGAG ATCCTGGAGA CGATCGCCCA TCCGACTCCG GCCCGCGACA TGGCCAACGT CGTGCTGCGC ATCCGCTCGC TGCAGCCCGA CCTCGTCGTT CCGTCGAACT ACTACGGCGA GTTCGTTCTC CTCGCCCGCA CCCTGCAGCA GCAGCGCGTC CGCCCCAAGG GCATCTACGC CATCCTCGGC GGCGGCGCGT CGAGCCTCCG CTTCGTCAAG GAGTTCCCTC AGGCCGCCGA GGGGGTGATG GATTGCAACC ACTGGCCCGA TCCGAAGAAC CCGGCCGCGG CCGAACTGCG CCGACGGACC GAGGCGGCCG GCCGCGCCTT CGCCTACAAC GTGCCGATGA ACTACTCGGC CGTGCGGCTG ATGGCCGAGG CGATCGAGAA GGCCGGCGCC CCCGACCGCG CCCGGATCAT CGAGGCGCTG GCCACGCAGA GCTTCGGCAG CGGCGTGATG CCCTACGGCC AGTCGCGCTT CGCCGGCGGC CAGAACGCCA GCGCGCTGCC CCTCAACACG CAGGTCCAGG GCGGCGACGT CAAGGTGATC GCCCCGGACG GCTTCGCCGA GGCCAAGCCG AACTTTCCCC TGAGGGCCTG A
|
Protein sequence | MIASDRVPNR RRVLTGGAAA ASLLAMPAVL RAEPAPVKIG ILQPLTGALA GDGDLGRLGA ELAVADLNAA GGLKALGGAR IEAVIADNRS NPEAAAQEAE RLAGEGVAAI VGGFGSGLCA TASQAAARYD LPYLIDVGVA DSLTQRGLRN TFRFSPSFSM VTTSALERLV ALNDGAGKPA RTVVIVHEDG LFGSGLAKLL QAELPKRGFE ILETIAHPTP ARDMANVVLR IRSLQPDLVV PSNYYGEFVL LARTLQQQRV RPKGIYAILG GGASSLRFVK EFPQAAEGVM DCNHWPDPKN PAAAELRRRT EAAGRAFAYN VPMNYSAVRL MAEAIEKAGA PDRARIIEAL ATQSFGSGVM PYGQSRFAGG QNASALPLNT QVQGGDVKVI APDGFAEAKP NFPLRA
|
| |