Gene M446_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1249 
Symbol 
ID6134204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1376832 
End bp1378190 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content54% 
IMG OID641641536 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001768207 
Protein GI170739552 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CCATCAAGGT GATTGTTATC GAGGACGACC CCGCGGTCCG CGCTGGGATC 
GAACAGGCGC TCGATCTGGC TGGCTTCGAT GTGCGATCCT TCGGATCGGC AGAATGGGTT
CGAAGCCATC TTCCCGGCGG TTTCGCTGGG GTCGTGGTTA CGGATGTCAA GCTTCCCGGA
ATGGATGGTC TGCAACTCCT GAAACACCTC CGTGACTTGG ATCCCAAGCT GCCGGTGATC
GTGATCACCG GCCATGGTGA CATCTCCATG GCGGTCCAGG CGATGCGGGA CGGCGCTTAC
GATTTTATCA CGAAACCGTT CGCTTCGGAG CAACTCGTCG GCGTTGTGCG GCGTGCGGTT
GAGAATCGCA ACCTGACTCT GCAAGTTGCC CACCTTCAGA AAAAGCTCGT TCGGCAAGCG
GTCGAGGCCG TTCTGATCGG CCAGTCCCCA GGGATCGAGA AGGTTCGGCG GATCATCAGT
GACGTCGCAG CCACTCAGGC GAGCGTGCTT ATCAATGGTG AGACCGGAAC CGGAAAAGAA
CTGGTCGCCC GCTGCCTGCA TGAACAGGGT AGCAGCAGCA GCGGCCATTT TGTTGCGCTG
AATTGTGGAG GGTTGCCGGA GCAGCTGTTT GAAAGCGAAA TGTTTGGGCA CGAAGCTGGG
GCATTTACCG GGGCTGCGAA GCGTCGGGTA GGTAAAATTG AGCACGCGCA CAACGGCACT
CTTTTTCTCG ACGAGATAGA AAGCATGCCG TGCAATTTGC AAGTAAAACT TCTTCGTGTT
TTACAAGAAC AGACCCTTGA GCGCCTTGGA TCAAACGCAC AAGTGCCTGT CAATTGCCGT
GTCGTAGCGG CCACAAAAGA TGACCTTCTT TCTCTCAGCG AGCAAAATCG GTTCCGTTCG
GATTTGTACT ACCGACTCAA CGTTGTCCCG ATTGATCTTC CGCCTCTTCG AGAACGACGT
GAAGATATAC CGCTTCTATT TGAGCATTTG ACGCTACTCT CTGCCCTTCG TTTCGGCCGT
GAAGCACCTG TGCCATCGGC CGGATTTGTG CGGCAGCTTC TAGCCCATTC CTGGCCTGGC
AATGTTCGCG AGCTTTCCAA TGTCGCGAGC CGCTTTGTAC TAGGCATGAA TGGAGCCGAA
AGAGTCGGAA GTCTGGGAAG TCCAAACATA AAGAACTCGT TAACGGACCA CGTTGACCAA
TTTGAGAGAA GTCTTATCCA AGACGAACTC AAAAGGCAAA ATGGCTGTGT CGCCACGGCA
AGTCAAGCAC TTGGTATTCC AAAGAAACCG CTTTATGGTA AGTTGCGCAG GTATCAGCTG
AACCTTGATC ATAAAGTATG GTGCGGGTCA GACCGCTGA
 
Protein sequence
MADAIKVIVI EDDPAVRAGI EQALDLAGFD VRSFGSAEWV RSHLPGGFAG VVVTDVKLPG 
MDGLQLLKHL RDLDPKLPVI VITGHGDISM AVQAMRDGAY DFITKPFASE QLVGVVRRAV
ENRNLTLQVA HLQKKLVRQA VEAVLIGQSP GIEKVRRIIS DVAATQASVL INGETGTGKE
LVARCLHEQG SSSSGHFVAL NCGGLPEQLF ESEMFGHEAG AFTGAAKRRV GKIEHAHNGT
LFLDEIESMP CNLQVKLLRV LQEQTLERLG SNAQVPVNCR VVAATKDDLL SLSEQNRFRS
DLYYRLNVVP IDLPPLRERR EDIPLLFEHL TLLSALRFGR EAPVPSAGFV RQLLAHSWPG
NVRELSNVAS RFVLGMNGAE RVGSLGSPNI KNSLTDHVDQ FERSLIQDEL KRQNGCVATA
SQALGIPKKP LYGKLRRYQL NLDHKVWCGS DR