Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1127 |
Symbol | |
ID | 6132014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 1254552 |
End bp | 1256498 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641641417 |
Product | glycoside hydrolase family 13 protein |
Protein accession | YP_001768089 |
Protein GI | 170739434 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.453988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCCA GCCAGACTCA CATCGGTCCC GACACGCCGA TGGGCGCCAC GGCGAGGCCC GGCGGCTGCA CTTTCCGGTG CTGGGCCCCG CGCGCCCTCG GCGTGTGGGT GACCGGCTCG TTCAACGGCT GGTCTCCTCG CGCGGAGGCG CAGCGGCTGG TGCGCGATCC CTCCGGCTGC TGGGCCGGCT TCGTACCGGG CGTCGGCGCG GGCGCGCAGT ACAAGTTCTA CGTCGACGGG CCGGGCTCGC GGGGATACAA GCGCGACCCT CACGCGCGCG AGATCGTCGC CCCGGACTGG AACTGCGTGG TGACCGATCC GGCGGCCTAT CCCTGGCACG ATGCGGGGTT CCGCCCGCCG GCCTACGAGG ACCTGATCAT CTACCAGCTC CATGTCGGGA CCTTCTTCGC CGTCGACGCG GCGGGGGCGG ACCGGCGCCA GGGCCGGGTC GCCACCTTCC TGGACGCGAT CGACCGGATC CCCTACCTCG CCGAGCTCGG CGTCACGGCC GTGCAGCCGC TGCCGATCGT GGAATTCCCG ACCGCCTTCA GCCTCGGCTA CAACGGCACC GACTATTTCT CGCCGGAATT TACCTATGCG GTGCCGGAGG CCGAACTCGG CCCCTCCCTG CGGCGCGCCA ACGCCCTCCT GGCCGCGCGC GGCCACGCCC CCGTGGCGGC GGCCGACATC CGGGACGCCG CCGGGCAGCT GCGCCTGTTC GTCGACCTGC TGCACGTCCA CGGCATCGCG GTGCTGTTCG ACGTCGTCTA CAATCACGCG GGCGGTGATT TCGGCGACGA GAGCCTGTAC TTCTTCGACC GGGTCCCGCA GGGCAACAAC AACGACAGCC TCTACTTCAC GGACCGGGGC TGGGCGGGCG GCCTCGTCTT CGCGTACTGG AACGCCCCGG TGCGCCGGTT CCTGATCGAC AATGCCGTGT TCCTGGCCCG GGAATTCCAC GTCGACGGGC TGCGCTACGA CGAGGTGAGC GTCATCGACG CGTTCGGCGG CTGGTCCTTC TGCCAGGACC TGACGGCGGC CCTGCGCGGC GCCAAGCCCT CGGCCGTGCA GGTCGCGGAG TACTGGGCGC CCGATCAGGC CGCCTGCGTG CGCCCGGCGG CGGAGGGCGG CGCGGGCTTC GACCTCGTCT GGCACGCGGG CCTGCGCGAG AGCGTGCGGC AGGCGCTCGC CCAGGCGGCG GGCGGGCGCG ACGCGGACGT GAACCTCGAC CCGGTCGCGC AGGCCCTGGC GGCGTGGAAC GGCCTCCCGC AGCGCTGGCG CGCGGTCCAG ATGCTGGAGA ACCACGACGT CCTGCTCGTC GCCCACGAGG CGAAGGACCG GCGCCCGCGC GTCCCGGCCG CCGCCGATCC GTCGAACGCG CGCTCGTGGT ACGCGCGCAG CCGCTCGCGG GTCGCGACGG GCCTGCTCCT CACCGGCCCC GGCATCCCGC TCCTGTTCAT GGGTCAGGAG TTCCTGGAGG ACAAGCTCTG GAGCGATTCC CCCGACGATC CCGACCACCG CATCTGGTGG GACGGCCTGC GGCAGGACCG GGCGATGGCG GATTTCCTGC GCTTCACGCG CGAGCTGATC GGCCTGCGCC GGGCGCAGCC GGCGCTGACC CGCGGCGAGA TCAACGTCTT CCACGTCCAC AATCTCAACC GCGTCATCGC GTATCATCGC TGGCTGCCGG GCCAGGGGCG GGACGTGGTC GTCGCCGCGA GCTTGGCGGA GGCCACGCGG CACGGCTACG CCCTCGGGTT CCCGCGGGGC GGGACGTGGC GCGAGGCCTT CAACAGCGAC GTCTACGACG GCTGGGTCAA TCCGGCGGTC GCCGGCAATT CCGGCGCGAT CGAGGCGGGC GGCCCGCCGC TGCACGGACT GCCGCACTCG GCGGCGGTGG TCCTGCCGGC CAACGCCGTC GTGGTCTTCG TCAAGGAGGA CCCGTGA
|
Protein sequence | MPASQTHIGP DTPMGATARP GGCTFRCWAP RALGVWVTGS FNGWSPRAEA QRLVRDPSGC WAGFVPGVGA GAQYKFYVDG PGSRGYKRDP HAREIVAPDW NCVVTDPAAY PWHDAGFRPP AYEDLIIYQL HVGTFFAVDA AGADRRQGRV ATFLDAIDRI PYLAELGVTA VQPLPIVEFP TAFSLGYNGT DYFSPEFTYA VPEAELGPSL RRANALLAAR GHAPVAAADI RDAAGQLRLF VDLLHVHGIA VLFDVVYNHA GGDFGDESLY FFDRVPQGNN NDSLYFTDRG WAGGLVFAYW NAPVRRFLID NAVFLAREFH VDGLRYDEVS VIDAFGGWSF CQDLTAALRG AKPSAVQVAE YWAPDQAACV RPAAEGGAGF DLVWHAGLRE SVRQALAQAA GGRDADVNLD PVAQALAAWN GLPQRWRAVQ MLENHDVLLV AHEAKDRRPR VPAAADPSNA RSWYARSRSR VATGLLLTGP GIPLLFMGQE FLEDKLWSDS PDDPDHRIWW DGLRQDRAMA DFLRFTRELI GLRRAQPALT RGEINVFHVH NLNRVIAYHR WLPGQGRDVV VAASLAEATR HGYALGFPRG GTWREAFNSD VYDGWVNPAV AGNSGAIEAG GPPLHGLPHS AAVVLPANAV VVFVKEDP
|
| |