Gene M446_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0954 
Symbol 
ID6131635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1079539 
End bp1080240 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID641641263 
Productphosphoglycolate phosphatase 
Protein accessionYP_001767937 
Protein GI170739282 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTC CCCTCTCCCT GGCGCCCATC GTGGTGTTCG ATCTCGACGG CACGCTCGCC 
GAGACGGCGA GCGACCTCAT CGGCACGCTC AACGTGATCC TGGCGCGCGA GGGCCTGCCG
CCGGCGGATG TGGGGCGGGC GCGGGACCTG ATCGGGGCGG GCGCCAAGGC GATGCTCGCG
CGCGGCTTCG CGGCCGCGGG CCGGGAGCTG ACGCCGGAGC GGCTGGAGGC GCTGTTCCGG
GTCTTCCTGG CCCATTACGG CGCGCATCTC TGCGAGAGCT CCTTCCTGTT CCCGGGCGCG
GCGGCGGCGC TCGACCGGCT GGCGGGGGCG GGCTACCGGC TTGCGGTCTG CACCAACAAG
GTGGAGGCGC ATTCGGTGGA GCTGCTGCGG GCGCTCGGCG TCGCGGACCG CTTCGCGGCG
ATCTGCGGGC GCGACACCTT CCCGTGGTTC AAGCCGGACC CGCGCCACCT CACCGAGACG
ATCGCGCGGG CGGGCGGCGA CCCGGCCCGG GCGGTGATGG TGGGGGATTC CCGCACCGAC
ATCGTGACCG CGCAGGCGGC CGGCATCCCG GTCGTGGCGG TGCCCTTCGG CTACACGGAC
GTGCCGGTGG AGGATCTCGG CCCCGACCTC GTCATCGGCC ATTTCGACGC GCTGTTCGAC
GCCGTGCAGC ACCTGCGCAC CCGCACCCGC TCGGCGGCGT GA
 
Protein sequence
MSPPLSLAPI VVFDLDGTLA ETASDLIGTL NVILAREGLP PADVGRARDL IGAGAKAMLA 
RGFAAAGREL TPERLEALFR VFLAHYGAHL CESSFLFPGA AAALDRLAGA GYRLAVCTNK
VEAHSVELLR ALGVADRFAA ICGRDTFPWF KPDPRHLTET IARAGGDPAR AVMVGDSRTD
IVTAQAAGIP VVAVPFGYTD VPVEDLGPDL VIGHFDALFD AVQHLRTRTR SAA