Gene M446_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0434 
Symbol 
ID6132104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp517852 
End bp518505 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID641640759 
ProductABC transporter related 
Protein accessionYP_001767435 
Protein GI170738780 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.554012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00307291 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCCGCT TCGAGAACGT CACCAAGATC TACAGGACGA GCGGGCATCG CCGCACCGTC 
CTCGACCGGG CCTCGTTCAC CATGCGCTCC GGGGTGAGCT ACGGCATCCT CGGCATCAAC
GGTGCGGGCA AGTCCACGAT GATCCGCATG ATGGCGGGGT CCGAGGGCCT GACCAAGGGC
CGGATCATCC GCACCTCGCG GGTGTCCTGG CCGCTCGGCT TCTCGGGCGG CTTCCACCCG
AACATGACCG GCAAGGAGAA CGCCATCTTC GTGGCGCGCG TCTACGGCGA GGACCCCTAC
AAGGTGCTCG ACTTCGTCAG CGATTTCGCC GAGATCGGCG ACTACATGAA CGTTCCGATC
CGCACCTACT CCTCGGGGAT GGGATCGCGC TTCAATTTCG GGATGAGCAT GGCGATCCCG
TTCGACACCT ACCTGATCGA CGAGATCACC TCGGTGGGCG ACGCCCGCTT CCAGCAGCGC
TGCGAGGAGG TGTGGAGCAA GCGGCGCGCG AACGCCGACA TTATCATGTG CTCCCACAAC
ATGGACGTGA TCCGCCAGTT CAGCTCCGAG GGCATCGTCC TGGCGAACGG GCGCGCGGTC
ATCTACTCGG ACGTCAACGA CGCCATCGAA GTCTACCAGA GGCTGAACCA GTAG
 
Protein sequence
MIRFENVTKI YRTSGHRRTV LDRASFTMRS GVSYGILGIN GAGKSTMIRM MAGSEGLTKG 
RIIRTSRVSW PLGFSGGFHP NMTGKENAIF VARVYGEDPY KVLDFVSDFA EIGDYMNVPI
RTYSSGMGSR FNFGMSMAIP FDTYLIDEIT SVGDARFQQR CEEVWSKRRA NADIIMCSHN
MDVIRQFSSE GIVLANGRAV IYSDVNDAIE VYQRLNQ