| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1618 |
|---|
| Symbol | |
|---|
| ID | 5188147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1674881 |
|---|
| End bp | 1676071 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591464 |
|---|
| Product | AAA family ATPase |
|---|
| Protein accession | YP_001272195 |
|---|
| Protein GI | 148544825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.654246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTC GGACAAAATA TCTTAACCAA CTAATAAACA ACATGGACCG GCCAACAATT
AAGATCCTCG TTGGGGTTCG TCGGTGTGGT AAAACAACTA TTCTTGACCA ATTCCGAGCA
ACTCTTCGGC GCCAAGAAAT ATCCCCAAGC CAAATTCAGG TGATCAACTT TGAATATCTC
CTAGAAAATG AATTATGCAA TCCAGAATAT CTTTTACAAT TTATCCTTGA TCGGCTTAGT
AAACACCAGA TGAATTATAT TTTTCTCGAT GAAGTTGAAG TGGTTCCCCA GTTTGCCCGC
GTTGTCAATG CCCTAAATTC ACTCTCCAAT ACTGATGTCT ATATTACAAG TTCCAACAAA
ACTATTCTGG AGAAAGAAAA TCTTCAACAA ATGACTCCCT ACATCATCAT CCCCGTTTTC
CCTTGCAGCT TCCGTGAATA CATAAAAAGG AACCAACAAG AAGCTGATTC CCAAACGTTA
TATCAATATT TAAATGAGGG TGGTTTCCCC TATACTCACG AAATTCACGG TCCAATCAAC
CTCCGTAATT ATGTGAATGG GATCATCAAC ACGATTATCA TTACCGATTT CACCCAGCAA
GCGACCCTTT GTAATCCAGG ACTAACTAAA CAACTCGCGC ATCACCTAGC TCATCACGCC
GGAACCACAC AAAATATCTC TCAGATTGTT GATAGTCTTA AACGTCACCA TATCACTACT
TCCAATAAGA CAGTCGATTT CTATTTGCAG TTCTTACAGA CGTCCTTTAT TTTTTACCCG
TGCAAAGAGT ATGATTTTTC TCGTCGCCAC GTCAAAAGCA CCAATATTCG TTATTATCCG
GTAGATCCCA GTATTCGTCA GGCGCTCACA CTAAAAAAGA ATGTCCTTTC TCAACGAATT
CTTGAAAATA TCGTCTTTAT TGACTTGTTG AGCCAAGGTT ACCAAGTATA TAGCGGCCGT
ATCAAAGATA ATGAAATTAC CTTTGTCGCA ATTAAAAATG ATATCTTTAC CTGTATTCAA
ATTGCTTATT CGCTTGCTGA TGATGGTGCC TATCGTCGGG CGATCAGCGG ATTACGGCAA
CTTTCCTCAA AATATAGAAA GCTTTTAATT ACAGTAAAAC CAGCGCTCAA TTACGCTGGC
TTAGATCCTG ATATTGAAAT TATTGACTTA TATAGCTGGC TAACCAATTA A
|
|---|
| Protein sequence | MFIRTKYLNQ LINNMDRPTI KILVGVRRCG KTTILDQFRA TLRRQEISPS QIQVINFEYL
LENELCNPEY LLQFILDRLS KHQMNYIFLD EVEVVPQFAR VVNALNSLSN TDVYITSSNK
TILEKENLQQ MTPYIIIPVF PCSFREYIKR NQQEADSQTL YQYLNEGGFP YTHEIHGPIN
LRNYVNGIIN TIIITDFTQQ ATLCNPGLTK QLAHHLAHHA GTTQNISQIV DSLKRHHITT
SNKTVDFYLQ FLQTSFIFYP CKEYDFSRRH VKSTNIRYYP VDPSIRQALT LKKNVLSQRI
LENIVFIDLL SQGYQVYSGR IKDNEITFVA IKNDIFTCIQ IAYSLADDGA YRRAISGLRQ
LSSKYRKLLI TVKPALNYAG LDPDIEIIDL YSWLTN
|
|---|
| |