| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1405 |
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| Symbol | |
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| ID | 5189236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1461474 |
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| End bp | 1462199 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640591254 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001271991 |
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| Protein GI | 148544621 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGTGAGA CTAGAATTGG TACTGTGACG TTGACTAAAG ATCCGGCGGA TCACTTCTTT
CTATCAATGC AACTAGCTTC AGATAAACCT TTCGTTAAAG AGTCCAAAAC TAATCACGGA
CATATTGGAA TTGATCTTAA TACTGATAAT TTCTTAACCG ATAGTGAAGG TAACACAGTT
CCTAATCCAC AATATTATCG CACTATTAAA GACAAATTAG CCAAAGAGCA GCGTATTTTA
TCTAGACGGC AATGGCGTGC AAAAAAAGAA CATCGTTCTT TACGAGACAG TAAAAATTAC
CAAAAGCAAC GCTTGTTAGT TGCTAAGCTT CATGCCAAAG TAATGAACCA AAGACATAAT
TTTCTTCAAC AAATCTCTAC TGCACTAATC AAGAACCACG ATTTAGTAGT AGCTGAGGAG
TTGCGTAGTA AGAATATGCT CAAAAATCAT GCTTTAGCGC TTAGTATCTC TGACGTTGGC
TGGCGTTCCT TTCTTGGCAT GTTAGCATAT AAAGCAGATC TGTATGGTCG GCAATTTATC
ACAATCAGCC CAAGAAATAC TACCCAAACA TGTCACAATT GTGGCTTTGT GATGGGTACT
AATGGCACGG ACAAACTAAC GTTAGCTGAC CGCAAATGGA CTTGTCCTAA CTGTGGTACT
CACCATATTC GTGACTGGAA CGCAGCTAAA AATATTCTTG ATAAGGGAAT AGCTAAACTA
GCCTAG
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| Protein sequence | MCETRIGTVT LTKDPADHFF LSMQLASDKP FVKESKTNHG HIGIDLNTDN FLTDSEGNTV
PNPQYYRTIK DKLAKEQRIL SRRQWRAKKE HRSLRDSKNY QKQRLLVAKL HAKVMNQRHN
FLQQISTALI KNHDLVVAEE LRSKNMLKNH ALALSISDVG WRSFLGMLAY KADLYGRQFI
TISPRNTTQT CHNCGFVMGT NGTDKLTLAD RKWTCPNCGT HHIRDWNAAK NILDKGIAKL
A
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