Gene Lreu_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1344 
Symbol 
ID5189330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1396605 
End bp1397234 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID640591195 
ProductIS30 family transposase 
Protein accessionYP_001271933 
Protein GI148544563 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATA AACATCTTAC TATAAAAGAA CGTGAAATGC TTATGTTTTT ACGAGCTAAG 
AGGTTATCTA TCCGGGCTGT TGCGTTACGG CTGGGGCGAA ATCCAAGCAC TATTTCACGA 
GAATTAAAAC GTTGTGCAGG TCATTATTCC CCAAGTAAAG AAGAAAATGA CTATCATCAA 
AAGCGAAAGA ATTGTCACAA GAAGCGGCTA TTAGACAGCC ATCCACAACT ACGCCGTCAA 
ATTGTTTATT ACATCTTAGA TCTGCACTGG TCACCAGAGC AGATTACCGC TCGCTTTAAT 
AAGGAACATC AATGGTGTGT TAGCTACAAC ACAATCTACC GTCATATCTA TCAACACAAT 
TTAGGTGAGA AGTACTCCTC ACATGGCGAT ACCGGTATTC AGCGCCATCT CAGACATAAA 
CATCGGACGC GGTATTCAAA GAATACTAGA CGACATCGAG AAGTACAGAC GGACTACATC 
TCAATTCATG AGCGCCCTGG TTTTATCAAC CAGCGTCAAC GTATTGGTGA CTGGGAAATC 
GATACTGTGA TTGGGCGAAC GGGTCATTCC ATCCTTTTAA CGGTTGTCGA TCGGCTTAGT 
CGGCTTACGC TTATCAAAAA GGTTGCGTGA
 
Protein sequence
MSYKHLTIKE REMLMFLRAK RLSIRAVALR LGRNPSTISR ELKRCAGHYS PSKEENDYHQ 
KRKNCHKKRL LDSHPQLRRQ IVYYILDLHW SPEQITARFN KEHQWCVSYN TIYRHIYQHN 
LGEKYSSHGD TGIQRHLRHK HRTRYSKNTR RHREVQTDYI SIHERPGFIN QRQRIGDWEI 
DTVIGRTGHS ILLTVVDRLS RLTLIKKVA