Gene Lreu_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1230 
Symbol 
ID5189660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1279836 
End bp1280393 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content40% 
IMG OID640591070 
Producthypothetical protein 
Protein accessionYP_001271824 
Protein GI148544454 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000525482 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATGGT CGTTAGCTGA ATTACATCGT TACCAAGATG AACCACTTCA TATTCAAAGT 
ACTTTTGATC TGAACGCATC ATTAACGAAG CTGTTTCCAG ATATTATTTT AGCTGTTCAA
CCAGTTAAAG TTGATGGTTA CGTTACTTAT GACGATGGTG ATGCAACGAT TAGCGCTCAT
GTTACAACGA CGTTAACCGT TCCATCTAGT CGCTCGTTAA CACCCGTTCA ATTACCGCTC
GATTTTACGT TCTCAGAGAC GTATATCGAT GATCGTTCAC ACTTTGCCCG CTATGAGGAT
GAAGATGAGG TTGTTTTCCT GATTAAAAAG GGTGATTCAA TTGATTTTGA TACTGCATTA
GCGGAAAATA TCGTTGAACA GGTACCACTA CGGGTTCTTT CTGCCGAAGA AAAGTCTGGC
AAACCAATGC CAAATGGAAA AGGTTGGAGT GTTATCTCTG AAGATGACTA CAAGGCCCAG
CAGCAGAAAG ATGACAAAGT TGATCCACGT CTCGCTAAGT TGCAAAACCT TTTTCCTGAT
CAGGATAACA AAAAATAG
 
Protein sequence
MKWSLAELHR YQDEPLHIQS TFDLNASLTK LFPDIILAVQ PVKVDGYVTY DDGDATISAH 
VTTTLTVPSS RSLTPVQLPL DFTFSETYID DRSHFARYED EDEVVFLIKK GDSIDFDTAL
AENIVEQVPL RVLSAEEKSG KPMPNGKGWS VISEDDYKAQ QQKDDKVDPR LAKLQNLFPD
QDNKK