Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1114 |
Symbol | |
ID | 5188586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1178809 |
End bp | 1179984 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590953 |
Product | HK97 family phage major capsid protein |
Protein accession | YP_001271708 |
Protein GI | 148544338 |
COG category | [R] General function prediction only |
COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATTA ATGAATTAAA TGATGCTTGG ATTGCCAAGG GTCAAGAAGT ATCTGATTTA AACAACAAGT TAAATGCTGC TGTTCTTGAT GACAATTTCA CTAAAGACAA GTTTGCTGAA TTAAAGGAAC AACGTGATAA CGCTAAAATT CAACGAGATG CTATTAAGGA TCAGCTTGAC GAAGCACGCG CTCAAAAAGT TAAGGCTATG AAGTCTGAAG ACAAGAAGCC TTTAAACAAA AAAGAAATGG ATATTAAAGA CCAATTTGTT CGTGAATTCA AGGACATGGT TACTTCTGGT AAGACTGGCA CGGGTAATGG TGGCCTAACT ATTCCGGACG ATATTCAATA CGCTATTCAT CAACTCGTTC GTCAATTTGC CACGTTACAA AACTTGGTAA ATGTTGAATC TGTTACTACA ACTACCGGTA CACGGACATA TGAAAAACTA AGTGACATTA CACCAATGAC CGATTTAGAT GATGAAACAG CTACTATTCC AGATATGGAC GATCCAGAAT TAACACTTAT TAAGTATGCT ATTCATCGAT ACGCAGCAAT TCAAACTGTT ACTAACAGTC TTTTAAAGGA TACTGTCGAA AACATCCTTG CTTGGTTGTC AAACTGGGTA GCAAAGAAGG TAACTGTTAC TCGTAATGCT AAGATTATCG AAGCAATGGG TAAGCCAGCT AAGAAGCCTA CTATCGCAAG CTTTGATGAT ATCAAAGATC TAGAAAATAA CACGTTAGAT CCGGCGATTA TGTCCAGTTC AAGTTTCGTT ACTAATCAAT CCGGTTATAA TGTCCTTTCT AAGGTTAAGG ACGCTCAAGG ACGTTATATG CTTCAACGTG ACGTAACCCA ACCAGATGTG TACCGTTTAG ATGGTAAGAC TATCACCGTA GTTGCTGACA AATGGTTACC TGACGTAGCG GCTGGCACTC ACCCGCTTTA CTTTGGTGAC TTGAAGCAAG GAATTACGCT TTATGATCGT GAGCATATGT CATTGCTTTC AACCAATATT GGTGCTGGCG CATTTGAACA TGATCTTTAC AAAGTGCGGG TTATTGACCG GTTTGACGTT GAAGTAATTG ATGATGGTGC TTGGGCTACT GCTTCATTCA AGGCTGTTGC CAACCAGCAA GCAACCACTC CAGAAGCTTC TGGTAAGACT GCCTAA
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Protein sequence | MGINELNDAW IAKGQEVSDL NNKLNAAVLD DNFTKDKFAE LKEQRDNAKI QRDAIKDQLD EARAQKVKAM KSEDKKPLNK KEMDIKDQFV REFKDMVTSG KTGTGNGGLT IPDDIQYAIH QLVRQFATLQ NLVNVESVTT TTGTRTYEKL SDITPMTDLD DETATIPDMD DPELTLIKYA IHRYAAIQTV TNSLLKDTVE NILAWLSNWV AKKVTVTRNA KIIEAMGKPA KKPTIASFDD IKDLENNTLD PAIMSSSSFV TNQSGYNVLS KVKDAQGRYM LQRDVTQPDV YRLDGKTITV VADKWLPDVA AGTHPLYFGD LKQGITLYDR EHMSLLSTNI GAGAFEHDLY KVRVIDRFDV EVIDDGAWAT ASFKAVANQQ ATTPEASGKT A
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