| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1086 |
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| Symbol | |
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| ID | 5188253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1149073 |
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| End bp | 1150995 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590925 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001271680 |
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| Protein GI | 148544310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components
[COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter
[TIGR00830] PTS system, glucose subfamily, IIA component |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATA GCCATAAGCT AACGGGAAAG CAGCTTATTT CTCGCGCTTC GTTTTGCTTT
GGTAACCTCG GGCACTCCGC ATTTTATGGG GTAATGAGTA CTTACTTTAT TATCTTTGTC
ACAAGCGGAA TGTTTGCAGG ACTAAGTAAA ACGGTTGCTA ATAAACTAAT TGGGTTGATT
ACTGGTTTGA TTGTTTCTGT CCGGATTTTG GAATTATTAA TTGATCCGCT ATTAGGAAAT
ATTGTTGATA ATACGAAGAC CCGGTGGGGA AAATTTAAGC CATGGATTTT AATGGGAAAT
ATCGTTAGCG CGATTTTGCT GTTAATCCTG TTTACCGGAA TCTTTGGTTT AGCAAAATAT
AACTGGGTTC TTTTTGCCAT TTTATTTGTT ATTATTTTCG TTACGTTTGA TATTTTCTAC
TCATTTTCTG ACGTTTCGTA TTGGGGAATG GTGCCCGCTT TAAGCGAAGA TTCTGAAGAG
CGGGGCGTTT ATACCGCTCT TGGTGCCTTT GCGGGAACAC TTGGCTGGAA TGGATTAACG
ATTATCGTGG TCCCGATTGT AACGACTTTT ACTTATTTAG CTACAGGTCA TCATCGGCAG
GGGCCAGCTG GTTGGTTTGC CTTTGCTGCC ATCATTTCGG CATTGGCTGT TATCTGTGCC
TTGGTTGTTT GTGTTGGGAC GAAAGAAAAT TACAATGTGA TCCGTAAGTC TGCCCAGGAT
AAGACAACCA TTCGGGAAGT TTTTTCAGCA ATTTTTCACA ATGACCAAAT CTTATGGCCA
AGTTTGGCAT ATTTACTTTA TTCATGTGCC TATGTTGTAA CTAATGGTGT CCTTTTCTAC
CTTTACAAGT TTGTTATTGG TAAACCTGGT GAATTCTGGA TTGTTGGGGT CATCGCTACG
ATTATCGGTT TCTGTACTAG TCCCCTTTAT CCTATTTTGA ATAAATTTAT TCCACGGAAA
TGGTTATTCA TTGGTGGCCA AGTCTGCATG AGTTTAGCAT ATTTAATCTT TATTTTTGCC
CGCTCTAATG TTTTAATGAT GGACTTTGGA TTGGTCTTGT TTAACATTAA TTTTGCCCAA
TTGGTAACAG TTTTAACATT AACGGATGCA ATTGAATATG GCCAATTAAA GTCTGGTCAA
CGAAATGAGG CGGTTGTCCT TGCTGTGCGA CCAATGATTG ATAAATTAAC AGGGGCGATC
TCAAATGGAC TTGTCGGTTA TATCGCAATT GCGGCCGGAA TGACGGGGAG CGCAACTGCT
GCTGACATGA CAGGTCATGA TATTCGGACT TTTGATAGTA TGGCCTTTTA TATCCCGCTG
GTATTAGCTG TTTTATCAAT TTTTGTCTTC CTTTTTAAGG TGAAATTGAG TGAAGAAGTT
CATGCGGAAG TAGTTGAAGA ATTAAAGGAT AAATTAGCAC AAGGAGAACT GACAAGTGAA
GCGTCGACAT CATCGACTGG TCTTAAAGAA GAAACGATTT ATGCCCCAAC AGATGGAGAA
TTAGTCGCCA TGAAAGAAGT TGTCGATCGT GATGGTCAAC CGTTCCCCGG CAAGGGCTTT
GCAATTAAGC CAACAAGTGA TAAGTTGTAC GCCCCATTTG ACGGTAAGAT TAATTTTACG
TTTGGCACCC GGCATGCGTT TGGCATTACT TCTGACAAGG GGTTAGAAAT GATTGTTCAT
ATTGGCGTCG GGACCGTGAA CATGCGTGGT GAAGGCTTCA ATGCCCATTA TAATGACGGT
CAAATCGTTA AAAAGGGTCA GTTACTCTTT GATTTTGATC GTGAATTGAT TAGACAAAGC
GGGTACGAAG ATTGGGTAAT TACTTTCTTT GCGCAACCGC ATAATATTAA AGCAACGGCT
GGTTTTACTC CCGGTAAGCT TATTAAGCAT GGCGATAAGG TAGTAACAGT AGAATTTAAA
TAG
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| Protein sequence | MTHSHKLTGK QLISRASFCF GNLGHSAFYG VMSTYFIIFV TSGMFAGLSK TVANKLIGLI
TGLIVSVRIL ELLIDPLLGN IVDNTKTRWG KFKPWILMGN IVSAILLLIL FTGIFGLAKY
NWVLFAILFV IIFVTFDIFY SFSDVSYWGM VPALSEDSEE RGVYTALGAF AGTLGWNGLT
IIVVPIVTTF TYLATGHHRQ GPAGWFAFAA IISALAVICA LVVCVGTKEN YNVIRKSAQD
KTTIREVFSA IFHNDQILWP SLAYLLYSCA YVVTNGVLFY LYKFVIGKPG EFWIVGVIAT
IIGFCTSPLY PILNKFIPRK WLFIGGQVCM SLAYLIFIFA RSNVLMMDFG LVLFNINFAQ
LVTVLTLTDA IEYGQLKSGQ RNEAVVLAVR PMIDKLTGAI SNGLVGYIAI AAGMTGSATA
ADMTGHDIRT FDSMAFYIPL VLAVLSIFVF LFKVKLSEEV HAEVVEELKD KLAQGELTSE
ASTSSTGLKE ETIYAPTDGE LVAMKEVVDR DGQPFPGKGF AIKPTSDKLY APFDGKINFT
FGTRHAFGIT SDKGLEMIVH IGVGTVNMRG EGFNAHYNDG QIVKKGQLLF DFDRELIRQS
GYEDWVITFF AQPHNIKATA GFTPGKLIKH GDKVVTVEFK
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