Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1016 |
Symbol | |
ID | 5189872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1067263 |
End bp | 1068522 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590855 |
Product | chloride channel, core |
Protein accession | YP_001271613 |
Protein GI | 148544243 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA CGCAAGAGAA CATTTCATTA GCTATTGCAA CGGTTGTTCT TGGAATAGTC GTTGGGTTTA GCTCATTGAT CCTTAGCGCT ATTCTAGATT TAACAGAGCA TTATTTTTTA AATTTTAACG AGACAAATAA GATTCCGGTT AATATTAATA TTTTTCCTAT TCATCGATTT GTCTCGGTGC TAATAGGGGG GATAATCGCT ACCATTATTT GGTACTTTCT TCAGCGCCAT TATCATCCAG TTAGCATTAA AAATGCCCTA AATGGTAAAG AGATGCCGTT AAGAAAAACA TTTATTCACG TAGTTACCCA GATCTTTTTT GTAGGGACTG GGAACTCGAT CGGTCGTGAA TTAGCCCCAC GAGAAGCAGG GGCGGCTATC GCTCAGAAAT GGTCCCGAGT GCTTGATTCT TATCGATGGT TGCACATCAA TGATGAAGAT AAACGTTTAT TAATCGCCGC TGCTGCTGGA GCTGGCTTCG CGGGGGTCTA TATTGCACCT ATTACAGGAA CTGTTTTCTG TTTAGAAATT TTATACCGGC GCATTAATAC TCGTTCAGTT TCCGTTAGCT TAATCATGTC AGTAATTGCA ACGATGATTG GTTCAATTTT AAAAGGATTC GAACCATATT ATATTGTCGG AAGCCGTGAT TTCTCTTTGC TATCCGTTCC ATTAGCAATT GTATTAGGCT TAATCCTTGG AGTAACCGGA ACCTGGTTTA AACAAGGAGT TAAAGCAGCT TCTAGTAAAC GGGCAACGGG TAAAAATATT TTCTGGCAAT TACCACTTTT ATCATTCTCA GCAGGAGCAA TTGCAGCCTT TTATCCGCAG ATTATGGGGA ACGGGCGGGG ACTTGCTCAA TTAGCTATGA ATACGACCAC TGTCAATTCC CAGGTCCTAG GAGCGCTCTT GTTTGGCCTC GTTGCTAAAG TAGTGGTTAC CCTATTTACA ATCAAATGTG GGGGCTATGG AGGAACACTG ACGCCATCGA TTGCCGCTGG AGCAGTTATT GGAGTATTTC TCGGTATTCC TTATATGCAC TTTTTCCCGA TTGTGACTTT AACGCAGTGT GCAGTTATCG GGGCCTCATT ATTTTTAGCA GCATCACAAC AAGCACCGTT AATGGCATTA TTTATGTTAT TTGAAGTTTG TCACCTTAAC TTTACAGCTT TTCTTCCCCT GGGGATTGGA GTCGCAATTT CAATTGGAAT TTCAAAATGG ATGCAGGAAG CAAAAGCAAG GACAAAATAA
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Protein sequence | MKETQENISL AIATVVLGIV VGFSSLILSA ILDLTEHYFL NFNETNKIPV NINIFPIHRF VSVLIGGIIA TIIWYFLQRH YHPVSIKNAL NGKEMPLRKT FIHVVTQIFF VGTGNSIGRE LAPREAGAAI AQKWSRVLDS YRWLHINDED KRLLIAAAAG AGFAGVYIAP ITGTVFCLEI LYRRINTRSV SVSLIMSVIA TMIGSILKGF EPYYIVGSRD FSLLSVPLAI VLGLILGVTG TWFKQGVKAA SSKRATGKNI FWQLPLLSFS AGAIAAFYPQ IMGNGRGLAQ LAMNTTTVNS QVLGALLFGL VAKVVVTLFT IKCGGYGGTL TPSIAAGAVI GVFLGIPYMH FFPIVTLTQC AVIGASLFLA ASQQAPLMAL FMLFEVCHLN FTAFLPLGIG VAISIGISKW MQEAKARTK
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