Gene Lreu_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0998 
Symbol 
ID5189170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1051270 
End bp1051917 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content35% 
IMG OID640590838 
Productphage integrase family protein 
Protein accessionYP_001271596 
Protein GI148544226 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00570052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTA AAAAACGCGT TTATATTCCT AAAAATAAGA CGAATGGTCA AATCAAGGGT 
AAACGGAAAA TATGGGTAGA AAATGTTAAA TTTTTGACTC TCGAAGAATA TGATCAGTTA 
CGTGAGACAA TTAAATTGCA TTCTCGTCCT GAATTAGTTA ATCGTAACCT ATTACTAATT 
GCGATTGCCC TTAATAACGG ATTGCGAGCA TCAGACGTTG TGACATTAAG GGTTGGTCAT 
GTTCTAAACA AAACTAAAAC CCGTGTTATT GAACAAAAAA CTGGTAAAGC TAAAACCCTC 
TTTTGGAATA ATTGCCTTGC CGAGATTATT GATTATCTTA ATGACTTGGA TTACAAAGAT 
GAAAATGATT ACCTTTTTCC CGGAAAACAA GAAGGCCATT TTTCGGTGCA TGGCTTTTAC 
GAGATGTTGC AACGAATGGC TAGAAAAACG GAAAATAATA AAATCGTTGC TAAGATTGGA 
ACACACTCTT TTAGAAAAAC TTTTGGTCGC CAACTCTATA AGAAGGGGGT TAACGTTGAA 
ATCATTTCGC AGTTGTTTAA TCACTCCTCC GAACGGAATA CGCGCCACTA TCTAGGGATT 
GAACAAGAAG ACCTTGATAA AGTGGTTCAA AATTTCAAAT TTGAATAG
 
Protein sequence
MSTKKRVYIP KNKTNGQIKG KRKIWVENVK FLTLEEYDQL RETIKLHSRP ELVNRNLLLI 
AIALNNGLRA SDVVTLRVGH VLNKTKTRVI EQKTGKAKTL FWNNCLAEII DYLNDLDYKD 
ENDYLFPGKQ EGHFSVHGFY EMLQRMARKT ENNKIVAKIG THSFRKTFGR QLYKKGVNVE 
IISQLFNHSS ERNTRHYLGI EQEDLDKVVQ NFKFE