Gene Lreu_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0948 
Symbol 
ID5188611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1005665 
End bp1006093 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID640590779 
ProductCopY family transcriptional regulator 
Protein accessionYP_001271547 
Protein GI148544177 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02698] copper transport repressor, CopY/TcrY family 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000394556 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA ATTTAGAAAT AACTCCCGCT GAATGGCAAA TTATGCGGGT GGTTTGGAGT 
CTAAGGCAAA CGACCAGTAG CCAAATTATT GAAATTTTAC AGAAAAAAGT TGACTGGAAA 
CCGGCAACGA TTAAGACTTT ACTTCGACGC CTGGTTGATA AAAAAGCCTT ATCTGCCACT 
CGTCAAGGAC GTGGATTTAT CTACGAGCCC TTAGTTCCTG AACAGCAAAC AATGGACCAA 
GCGGCGGACA ACTTGTTTAA TAATATTTGT GAACGACACG TTGGAAGCAC CCTTGAACAT 
GTGATCAATA ATGTAACCCT TAGTAAGGAT GATATTGCTA AGTTACAAGA ATTATTGGCA 
AGCAAAGCAA CTAATTCACC GGACCACGTC AAATGTAACT GCATTCCTGA TATGCAGATG 
AACTGCTAA
 
Protein sequence
MNINLEITPA EWQIMRVVWS LRQTTSSQII EILQKKVDWK PATIKTLLRR LVDKKALSAT 
RQGRGFIYEP LVPEQQTMDQ AADNLFNNIC ERHVGSTLEH VINNVTLSKD DIAKLQELLA 
SKATNSPDHV KCNCIPDMQM NC