| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0676 |
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| Symbol | |
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| ID | 5189557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 742756 |
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| End bp | 743913 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640590510 |
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| Product | hydroxymethylglutaryl-CoA synthase |
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| Protein accession | YP_001271278 |
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| Protein GI | 148543908 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000283469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTG GTATTGACAA AATGGCTTTT GCAACAACAA ATGATTATTT AGATCTTGTT
GAATTAGCAA AAGAACGCGG CGTAGATCCT AATAAATTTA CCATTGGAAT TGGACAGGAT
CTACAGGCAG TTGTGCCACC TACGCAAGAT ATTGTGACTT TAGGAGCTAC GGCAGCGAAA
AAATTGCTTA CTCCAGAATT AGAAAAAAAT ATTTCGACAG TAATTGTGGC AACTGAGTCA
GGGATTGACA ATTCAAAAGC AAGTGCAATC TACATTAAAC ACTTATTAGG ACTTAGCGAC
TTTATCCGAA CGGTAGAAAT GAAAGAGGCA TGTTATTCTG CGACAGCTGC TATCCAATTT
GCAAAGGGGG TAGTGGCGCT TAATCCTCAA GAAACTGTAT TGGTGATCGC TGCTGATATT
GCTCGTTATG GATTAAATAC TCCAGGAGAG GTGACTCAAG GAGCTGGAGC AGTTGCAATG
CTGATTTCAC AGAACCCTCA CATCCTAACC CTTGAAGATA CAACTGTCGC TTATAGCAAA
GATATAATGG ACTTTTGGCG GCCGTTATAT GCAACAGAAG CTTTAGTAGA TGGAAAATAC
TCTACTAATG TTTATATTGA ATTTTTCCTT CAAACTTTTA CCCGTTACCA GCAATTAACT
GGTCGAGAAT TAGCAGATTT TGCTGCCCTT ACATTCCATA TGCCATTTAC TAAAATGGGA
AAGAAAGGGT TAGAAGGGTT GCTTAAAGAT CGTAATGATG AGGTAGCTCA ACGATTACGA
ACACAATTAA CCGCAAGTCA GCTATTTTCG CGTCAAGTTG GCAATCTTTA CACTGGCTCC
CTATATTTAT CATTAATGTC ATTGTTACAA AATAGTGACT TAAGAGCTGG AAGCCGAATT
GGGTTATTTA GCTATGGTTC TGGTGCAGAA GGAGAGTTCT ACACAGGAAT CCTAGAAGAT
GGCTACGAGC ATTATATGAA TAATATTCAA GAAGAACTAA AACATCGTCA TCAGGTTTCG
GTGGCAGAAT ACGAAAAACT ATTTAGTAGT CAATTAGGAA TGAATGATCG GGATATCGAA
TTTGATGTTG CTGATGATCC ATTGCCTTTC GTTCTTAAAG GACAAAAAGA TCACCAACGG
ATTTATGAAG CTAAATAA
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| Protein sequence | MRIGIDKMAF ATTNDYLDLV ELAKERGVDP NKFTIGIGQD LQAVVPPTQD IVTLGATAAK
KLLTPELEKN ISTVIVATES GIDNSKASAI YIKHLLGLSD FIRTVEMKEA CYSATAAIQF
AKGVVALNPQ ETVLVIAADI ARYGLNTPGE VTQGAGAVAM LISQNPHILT LEDTTVAYSK
DIMDFWRPLY ATEALVDGKY STNVYIEFFL QTFTRYQQLT GRELADFAAL TFHMPFTKMG
KKGLEGLLKD RNDEVAQRLR TQLTASQLFS RQVGNLYTGS LYLSLMSLLQ NSDLRAGSRI
GLFSYGSGAE GEFYTGILED GYEHYMNNIQ EELKHRHQVS VAEYEKLFSS QLGMNDRDIE
FDVADDPLPF VLKGQKDHQR IYEAK
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