Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0657 |
Symbol | uvrC |
ID | 5189028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 724948 |
End bp | 726759 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590490 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001271259 |
Protein GI | 148543889 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000040695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTG AACATTTAGA ACATAAACTA GCATTGTTAC CTGACAAGCC AGGTTGCTAC CTGATGAAAA ACATTAATGA TCAGATAATT TATGTTGGTA AAGCTAAAAA TTTGAAGAAT CGGGTTCGCT CTTACTTTAA GAGTAGTCAC ACCGGTAAAG TAGCTAAAAT GGTTTCGGAA GTTGCAGACT TTGAAACCAT TGTAACTTCG ACTAATAAAG AGTCGTTCTT ACTCGAAATA ACGCTGATTC AAAAACATCA ACCTTATTTC AATATCAAAT TAAAAAAGGG AACTGGTTAT CCCTACATAA AAATAACAAA TGAGCGAGAT CCTCAAATTA AGATCGTTAG TAAAATAAAA AAAGATGGTG GATATTATTT TGGCCCTTAT CCAAATGTCT ATGCTGCGGA GGAAACGATG CATTTTATTC AAAAGGTTTA CCCATTAAGA CGATGTAATG GGTACCAAGG CCGTCCGTGT TTGTATTACC ATATGGGACA ATGTTTAGGA GCTTGTTTTA AAGAAGTTCC TAAGAGTGAC TACGAAGAGC AAATTAAGAA AATTAAGTCA TTTTTGAGTG GAAACACAGC GACAGTTAAG CGACAGTTAA CCAAAAAGAT GCAACGAGCA GCAGAAAATA TGGAGTTTGA ACGAGCGGCT GAAATTCGAG ACCAGCTTCA CTATATTGAA GTAACGGTTG AAAAACAAAA GATTATTTCA AATGATAAGA CCCCTCGTGA TTTGTTTAAT TTCTATATGG ATAAAGGGTG GCTTTCTATT CAAATTTTCT TTATCCGACA AGCACGGTTA ATGAAACGAG AAAAACGTCT ATTTCCAATC GTGGATACGG CAGTCGAAGA AATGACCAGC TTTATTCTTC AATTTTATAA TCGTCGTAAT AATATTTTGC CGCATGAAAT TCTCCTTCCC AAGGGTCTCC CTAATAAAGA AATAAGTGAA ATACTAGGGG TGCCGGTTCG GACACCTGTT CGGGGAGAAA AACGAGATCT CTTAGCAATG GCACATGAAA ATGCTCAGTT GTCCTTAGAT GAAAAATTTC GACTGCTTGA GATGGACCAA AGTAAGACTA CCGGTGCGAT GAAAGAGATT ACGGATGCCC TTGGACTTCC AGAAGGTCAC CGGATTGAAG CATTTGATCA TTCTCATATT CAGGGGGCTG ACCCCGTCAG TGCAATGGTT GTATTTATTA ATGGAGAACC GGCTAAAAAT TTTTACCGGA AGTATAAATT GAAAACGGTG ATTAATCATG CTGACGAAGC TGCCAGTACC CGTGAAGTTA TTCGGCGGAG GTATTCGCGT CTCTTAAAAG AGAATAAGCC AATGCCGGAT ATGATTTTTA TGGATGGTGG CGAAATTCAG ATGGATGCGG CTAAAGATGT TTTAGAGAAT GAACTTGGTC TCGAGATTCC GGTAGTAGGG ATGGTAAAGA ATGATAAACA CCAAACCGCT GACTTATTGT TCGGGGATGA TGATCACCAT ATTAATTTGA ATCCACGGAG CCAAGGCTTT TACTTAGTTC AACGCATTCA AGATGAGGTT CACCGGTTTG CGATTACTTT CCACCGGCGC GTTCATACTA AGCATTCGTT GAGCTCGCGT TTGGATGAAA TTAAGGGAGT GGGACCCCGA ACTCGAACAA AATTGCTTAA AAAATATGGA TCAATTACCA AAATTGCTCA AGCCTCAGTT GATGAAATCC ATTCACTAGG AATTAATCGA CCTACCGCCC AGTTAATCAA GGTTTCATTG CAGAAAAATG CTGAGGTGGC GAAGGGTAGT AGTCATGATT GA
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Protein sequence | MASEHLEHKL ALLPDKPGCY LMKNINDQII YVGKAKNLKN RVRSYFKSSH TGKVAKMVSE VADFETIVTS TNKESFLLEI TLIQKHQPYF NIKLKKGTGY PYIKITNERD PQIKIVSKIK KDGGYYFGPY PNVYAAEETM HFIQKVYPLR RCNGYQGRPC LYYHMGQCLG ACFKEVPKSD YEEQIKKIKS FLSGNTATVK RQLTKKMQRA AENMEFERAA EIRDQLHYIE VTVEKQKIIS NDKTPRDLFN FYMDKGWLSI QIFFIRQARL MKREKRLFPI VDTAVEEMTS FILQFYNRRN NILPHEILLP KGLPNKEISE ILGVPVRTPV RGEKRDLLAM AHENAQLSLD EKFRLLEMDQ SKTTGAMKEI TDALGLPEGH RIEAFDHSHI QGADPVSAMV VFINGEPAKN FYRKYKLKTV INHADEAAST REVIRRRYSR LLKENKPMPD MIFMDGGEIQ MDAAKDVLEN ELGLEIPVVG MVKNDKHQTA DLLFGDDDHH INLNPRSQGF YLVQRIQDEV HRFAITFHRR VHTKHSLSSR LDEIKGVGPR TRTKLLKKYG SITKIAQASV DEIHSLGINR PTAQLIKVSL QKNAEVAKGS SHD
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