Gene Lreu_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0520 
Symbol 
ID5189257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp580272 
End bp581309 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content40% 
IMG OID640590327 
Producthypothetical protein 
Protein accessionYP_001271125 
Protein GI148543755 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA ACGAGAACGA TCAAAAACGA CTTGAAATCG GTAAAATTTT ACGAAAAGCA 
CGGGAAGAAA AGGGCTATAC CCTTGATGAC CTTCAACAAA TGACTAAGAT TCAAAAGCGG
TATTTAATCG CGATTGAAGA TGAAAATTTT GATGAACTTC CTGGTGACTT TTATGTTCGT
GCGTTCATTA AGCAATATGC CAATACGGTA GGCTTAGATG GTAATGAATT ATTGCAAAAA
TATGATGATC AATTACCACA GACTAAAACG GAAGAGTATT CCGATCATTT AGCTCAAGCG
GTTGAAACTC GTGCGAACCA ACGGAAGACG GTTAGCGGGA GCGTAGACAA GGTTCGTAAC
TACATGCCAA CGATTATTAT TGCTTGTGTG ATTGTTTTAG TGTTGGCAGC GATTTGGATT
ACGGCCATTG CTCGCAACCA TCGCGATTCC TCTACACGGA TTGATAATAG TTCGGTATCT
GTTTCTGGAG AGAGTCGTAA GAAAGCCGCT ACCTCTGCTA AAAAAGCAAG TACAAAGCAG
AGCAAATCGA CAGCAATCAA GCTCCAAGAA GCACCTAATC GGAATGACAC AAGCGTTACT
TATACAGCAA GTCAACTTAC TAAAGACACA ACGCTACAAA TTGAACCAAG TGATCGTTCA
TGGATGCAGG TAAGGGCAAA TAATAATGAC TTATTAAACA AAACTTTGAA TAACAATGAA
AAAACTAGTG TAAAAATAAG TCGTGATACA ACTTCATTAG TAATTACGGT CGGCAATGCT
CGAGCAACAA AGTTAAAGCT CGGTAATCAA GAAATCTACT TTACTAATAA TGGCCGTTAC
CAAAACACGC GGAATGTAAC GATTAACTTT GGTAATGCCC AAACAAGCAG CAGTTCAGCA
AGTCAGTCAG CAAATAGTTC AAGTCAAGCT TCTTCATCCT CGGCTCGTCC TAATAATGCT
ACGCAACCAT CTGCTGCTAA TAATAACAGT CGTCCTCAGA CAAGTGCTAG TCAGCAAAAT
AATCAACCAA CTCGTTAA
 
Protein sequence
MSENENDQKR LEIGKILRKA REEKGYTLDD LQQMTKIQKR YLIAIEDENF DELPGDFYVR 
AFIKQYANTV GLDGNELLQK YDDQLPQTKT EEYSDHLAQA VETRANQRKT VSGSVDKVRN
YMPTIIIACV IVLVLAAIWI TAIARNHRDS STRIDNSSVS VSGESRKKAA TSAKKASTKQ
SKSTAIKLQE APNRNDTSVT YTASQLTKDT TLQIEPSDRS WMQVRANNND LLNKTLNNNE
KTSVKISRDT TSLVITVGNA RATKLKLGNQ EIYFTNNGRY QNTRNVTINF GNAQTSSSSA
SQSANSSSQA SSSSARPNNA TQPSAANNNS RPQTSASQQN NQPTR