Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0500 |
Symbol | rpsD |
ID | 5189779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 554127 |
End bp | 554732 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640590307 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001271105 |
Protein GI | 148543735 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000917743 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTT ACACTGGTCC AAGTTGGCGT GTTTCACGTC GTCTTGGCGT TTCACTTTCA GGTACTGGTA AAGAATTAGC ACGTCGGGCT TACGCTCCTG GTGACCACGG TCGTGATCGT CGCGGTAAGC TTTCAGAATA TGGTACACAA TTACGTGAAA AGCAAAAGCT ACGTTTTATG TACGGTATGA CTGAACGTCA ATTCTCAAAC CTTTTCGTTC GTGCCGGTAA GATTAAGGAA GGTACTCACG GTGCCAACTT TATGGCATTG CTTGAACGTC GTCTTGATAA CATGGTTTAC CGTCTTGGTT TAGCCACTAC TCGTCGTCAA GCTCGTCAAT TAGTTAACCA CGGTCACATC ACTGTTGATG GTAAGCGTGT TGACATTCCA TCATACGAAG TTAAGGTTGG TCAAATCATC GCCGTTCGTG ACAAGTCTAA GAACTTAGAC ATCATCAAGA ACGCTGTAGA AGCTGTTGTT TCTCGTCCTT CATACGTTGA CTTTGATGCC GACAAGCTTG AAGGTAAGCT TAACCGCATT CCAGCACGTG AAGATATGAA CGCTGATATT GATGAAGCTC TTATCGTTGA ATTCTACAAC AAGTAA
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Protein sequence | MSRYTGPSWR VSRRLGVSLS GTGKELARRA YAPGDHGRDR RGKLSEYGTQ LREKQKLRFM YGMTERQFSN LFVRAGKIKE GTHGANFMAL LERRLDNMVY RLGLATTRRQ ARQLVNHGHI TVDGKRVDIP SYEVKVGQII AVRDKSKNLD IIKNAVEAVV SRPSYVDFDA DKLEGKLNRI PAREDMNADI DEALIVEFYN K
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