| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0479 |
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| Symbol | |
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| ID | 5190005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 532927 |
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| End bp | 534342 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640590286 |
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| Product | sugar transporter |
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| Protein accession | YP_001271084 |
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| Protein GI | 148543714 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000749242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAG CCGAGAAGAA AATATCAAGT GCATTTATCT ACTTCTTCGG ATCATTTGGG
GGCATCCTAT TTGGTTACGA TATCGGTGTT ATGACTGGTG CCTTACCTTT CTTACAAGCT
GATTGGCACC TTGAAAATGC AGCTTCTCTC GTTGGTTGGA TTACTTCAGC AGTTATGTTT
GGGGCAATCT TCGGGGGCGC ATTAGCCGGA CAGCTTTCTG ATAAGTTTGG TCGGCGGAAA
ATGATTTTAA TGTCTGCGAT TGTATTCATG GTATTCTCCG TTTTATCTGG TGTTTCACCA
GACATGGGCG AAGCAAGTGC CTATTATCTG ATTATTGTTC GGATGCTTTT AGGTTTAGCG
GTTGGGGCTG CCTCAGCCTT GGTACCAGCT TATATGTCCG AAATGGCACC AGCTAAAGCG
CGTGGACGTT TATCTGGACT TAACCAAACA ATGATTGTTT CCGGAATGTT ATTGTCATAT
GTTGTTGACT TCCTATTGAA AGACCTTCCT GGTGAATGGG CATGGCGTCT TATGTTAGGA
TTGGCAGCTG TTCCTGCTTT AATCTTATTC CTTGGTGTTC TTCGTTTGCC AGAATCTCCA
CGGTTCTTAT TGCGTAAAGG TGATGAAGCA CAAGCACGGA AAGTTCTTTC TTACATTCGT
AAAAATCCAG CTGAGATTGA CCAAGAATTA GCAAGTATTA AAGAAACTGC TAAAGAAGAG
CGACAAGCAA ATCAAAAGAC AAGTTGGTCA ACCTTATTCA GTGGCAAGTA TCGTTACCTA
GTTATTGCTG GGGTTGGGGT TGCAGCCTTC CAACAATTCC AAGGTGCAAA CGCGATCTTC
TACTACATTC CATTAATTGT TCAAAAAGCA ACTGGCCAAG CTGCATCTTC AAACTTAATG
TGGCCAATTG TTCAAGGGGT TATTTTAGTT GTTGGTTCCC TGGTTTACAT GTGGATTGCT
GATAAATTTA ACCGGCGGAC ATTGTTGATG GTTGGTGGTG CTGTCATGGG ACTTTCTTTC
ATTCTTCCAG CCGTTATTAA TTGGATGATG CCAAATATGA ATCCGATGAC AATTGTTGTG
TTCTTATGTA TCTATGTTGC TTTCTACTCC TTCACATGGG CTCCGTTAAC ATGGGTGCTT
GTTGGTGAAA TCTTCCCACT AGCTATCCGG GGTCGTGCCT CTGGTTTAGC TTCATCATTT
AACTGGATTG GATCATGGTT AGTTGGTCTT ATCTTCCCAA TTATGACGGC AAGTATGCCA
CAAGAAGCTG TTTTTGCGAT CTTCGGAATT ATCTGTATCT TAGGAGTTCT CTTTGTTAAG
ACTTGTGTTC CAGAAACTCG TGGGCACACT CTTGAAGAAA TTGAAGAGCA AGGAACAAAC
CATGGTCGAG TAAAGGCCAG CAATCCTGAA AACTAG
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| Protein sequence | MAKAEKKISS AFIYFFGSFG GILFGYDIGV MTGALPFLQA DWHLENAASL VGWITSAVMF
GAIFGGALAG QLSDKFGRRK MILMSAIVFM VFSVLSGVSP DMGEASAYYL IIVRMLLGLA
VGAASALVPA YMSEMAPAKA RGRLSGLNQT MIVSGMLLSY VVDFLLKDLP GEWAWRLMLG
LAAVPALILF LGVLRLPESP RFLLRKGDEA QARKVLSYIR KNPAEIDQEL ASIKETAKEE
RQANQKTSWS TLFSGKYRYL VIAGVGVAAF QQFQGANAIF YYIPLIVQKA TGQAASSNLM
WPIVQGVILV VGSLVYMWIA DKFNRRTLLM VGGAVMGLSF ILPAVINWMM PNMNPMTIVV
FLCIYVAFYS FTWAPLTWVL VGEIFPLAIR GRASGLASSF NWIGSWLVGL IFPIMTASMP
QEAVFAIFGI ICILGVLFVK TCVPETRGHT LEEIEEQGTN HGRVKASNPE N
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