Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0461 |
Symbol | |
ID | 5189814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 516979 |
End bp | 517686 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590268 |
Product | ATP synthase F0, A subunit |
Protein accession | YP_001271066 |
Protein GI | 148543696 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000814456 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGGTG ATGCTTTAAC TTTTAAGCTT TTCGGACTCA CGTTCAATAC TACGAACATT GTTTCTGGAC TGATTATCTA CGCAATCGTG TTCTTCACTC TTTACGGGAT GTCACGAAAG ATCCAAATGA AGCCTACTGG TGCACAAAAT GTATTTGAGT GGCTAGTTGA CTTTACTAAT GGAATTGTGC GAAGTCAGAT GCCAGCATCC GAACAAGGGC ACTATAGTTT CTTTGCCTTT GTTTTGTTTG TTTTCATTTT CTTTGCAAAC CAATTCGGTT TAATTTTCCA ATTCCATTGG AACGGAGCTG AAGTGCTTAG AAGTCCAACG GCAGATCCAG TTGTTACGTT AACACTTTCT TTAATGGTAA TGGTATTAGC ATTCGCTGCT GGAGTAGCAC ATAATGGCCT TGGTGGATAC TTGAAAGGAT ACACTAAACC ATTTACTTTA ATGCTTCCTG TTAACATTAT CGAAGACTTT GCTAACTTCT TAACTCTTGG TCTCCGTATT TTTGGTAACA TTTTTGCCGG TGAACTTTTA ATGAGTTTGA TTGCTAATAT GGCATTCTCA CATGGAATCC TAACTATTAT TCCAGGACTA TTTTTGGAAC TAGCATGGCA AGGGTTCTCC GTATTTATCG GTTCGATTCA GGCATATGTC TTTGTAACAT TAACGACGGT TTATATTTCT CGGAAGATTT CCGAATAA
|
Protein sequence | MGGDALTFKL FGLTFNTTNI VSGLIIYAIV FFTLYGMSRK IQMKPTGAQN VFEWLVDFTN GIVRSQMPAS EQGHYSFFAF VLFVFIFFAN QFGLIFQFHW NGAEVLRSPT ADPVVTLTLS LMVMVLAFAA GVAHNGLGGY LKGYTKPFTL MLPVNIIEDF ANFLTLGLRI FGNIFAGELL MSLIANMAFS HGILTIIPGL FLELAWQGFS VFIGSIQAYV FVTLTTVYIS RKISE
|
| |