Gene Lreu_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0415 
Symbol 
ID5188856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp468521 
End bp469132 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID640590220 
Productpeptidoglycan-binding LysM 
Protein accessionYP_001271021 
Protein GI148543651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00826728 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCTA AGAAAAACTT TGCTAAAGTA TCTGCTACTC TTGGTGCAGT GGCCTTAGGT 
GTTAGTGCAA CGGCTACTGC TGCTAATGCC GACACTATCT ACACCGTGCA AAGTGGTGAC 
ACACTTTCAG GTATTTCTTA CAAATTCGCA AAAGACAACA GTATGGTCAA TGATCTTGCT 
AAGAAGAACA ATATTCAAGA TATTAACAAG ATTTACGTTG GTCAAAAGTT AATCATCAAG 
AGCGATGGTG AAATTCAAGA ATACAACGCT CAAAACGCAG CTAATGCAAA TGTAGCTGAC 
AATAATACTC AAGCTACTCA ACAACAAACT GCACAACCTC AACAAGCTCA AAGTCAAGCT 
AGCCAAAGTT ATACTTCAAA TGCTTCAGGT TCAGAAGCTG CTGCTAAGGC TTGGATTGCC 
GCTCGTGAAT CTGGTGGTAA CTACGGTGCT ACTAACGGTC AATACATTGG TAAGTACCAA 
TTATCAGCAT CATACCTTAA CGGTGACTAC TCGGCAGCTA ACCAAGAACG GGTTGCTGAC 
CAATACGTTG CAAGTCGTTA CGGTTCATGG CAAAATGCTC AGGCTCACTG GCAAGCTAAT 
GGCTGGTACT AA
 
Protein sequence
MISKKNFAKV SATLGAVALG VSATATAANA DTIYTVQSGD TLSGISYKFA KDNSMVNDLA 
KKNNIQDINK IYVGQKLIIK SDGEIQEYNA QNAANANVAD NNTQATQQQT AQPQQAQSQA 
SQSYTSNASG SEAAAKAWIA ARESGGNYGA TNGQYIGKYQ LSASYLNGDY SAANQERVAD 
QYVASRYGSW QNAQAHWQAN GWY