Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0350 |
Symbol | |
ID | 5188587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 396620 |
End bp | 398230 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590155 |
Product | transposase, IS4 family protein |
Protein accession | YP_001270956 |
Protein GI | 148543586 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAA ATTATACCAT AGGGCAAACC GAATTCGTAC TAAACTATAA CTATGATTTA CCACAGAATC ATGTTGCGCG ACTAATTAGT GATTTTGTCG ACTCGATTCC ACAAGATGTG CTATTAGAAG ATTCAGGAGC GGCTACCGGC CGCCCTTTAT CGCATCCAGC AATTATGCTT AAGATTCTCT TGTTTGCCTA CTCACGTCAA ACTTATTCTG GAAGAAAGAT TGAAATGATG TTGGATGAGA ACCTGCCAAT GCGTTGGTTA GCCCATGATT ATACTTATAG CTACCATACC ATCAATAACT TTCGCCGCAG TCAGCACGCT AGTAAGCTAA TTAAACATGC CTTTGTCTAC TTTACCATGA CTTTGAAAGA TCACGGACTA ATTCAAAATG ATGCAGTTTT TATCGATGGG ACCAAGGTAG AAGCCGATGC CAATAAATAT TCATTTACTT GGCGGCGGGC AGTTGAAAAG TATCACGCTA AGTTAAGAGA AAAGACAAGT AAGCTTTATG AGGAACTAGT AGAAAAGCAA GTGGTACAGG AAATGGCACC GGAGCTGGTT ACTTCCGCCG AAGGCATGGA AGTAATGGAA CAAGAACTGG CGGAGAAAAT CACTAAATTA GATGAAAAGA TTAAGCAAGA ACCAAAAATC ATCAAAGGGG GTTCAGTTAG AAAACGGCGC CGTCGTTTTC TAAAAAAGCT TCGTCACCAA TTAAGCAACG ACCTAATTCC GCGTGCCCAA AAGTATGAAC GTGCTGAAAA TATCTTCCAA GGTCGTAATA GCTATTCCAA AACTGACCAC GATGCGACCT TTATGTGTAT GAAGGAAGAT CCGATGATGA ATCGGGAGTT GAAGCCTGGC TATAACCTGC AAATCGCTAC CCATAAGCAA TTTGTGCTTG ATTACGGGCT GTTTTCAAAT CCAACTGACA CCAGGACCTT AGTGCCATTC CTTACCCAGT TTCATGCTTT AGATTTCTTT GAACATATCG TCGCCGATGC AGGCTATGGA AGTGAGTACA ATTACACAAT GATTCTTGAT CGGTTTGAAA AGCAGCCGGT TATCCCATAC ACAACCTATC AAAAGGAACA GAAACGTAAA TTTAAAAACG ATCCAACTAG GTCACAGAAT TGGGAATATA ACGCTAATGA CGACTACTAC ATTGATCATC AAGGAGTTCG TTTTAGTTTT TATCGCTATA GTAAATCCAC TGATAAGTAT GGCTTTAAGC GTGACTTTAA AATCTATCGT GCTGATAAAC ATCAACTATC AGTTAAATTA GATGAACTAG CGAAGACACC AGGTGGTCGT CAACGTTATA TGAAGGTTAA CCCAACCTGG AATTATTATA AAGCTAAAGT TAAAGATGCC CTCTCAAGTG ACGAAGGCAA GGCAATTTAT CGTCGACGGA AGTTCGACGT TGAGCCAGTC TTTGGTCACA TGAAGAGGGA TTTTGGCATA CGCCGAACTC ATCTCCGTGG CCAACGGGCT GTGGAAAATG ACATTGGGCT AGCCCTGATG GCATTAAATC TAACGAAATT TGGCCAATCA ATTAGTCGAT TGGAGACTAA TTTCATAAAT AATTTAAAAT CCGGACTATG A
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Protein sequence | MYQNYTIGQT EFVLNYNYDL PQNHVARLIS DFVDSIPQDV LLEDSGAATG RPLSHPAIML KILLFAYSRQ TYSGRKIEMM LDENLPMRWL AHDYTYSYHT INNFRRSQHA SKLIKHAFVY FTMTLKDHGL IQNDAVFIDG TKVEADANKY SFTWRRAVEK YHAKLREKTS KLYEELVEKQ VVQEMAPELV TSAEGMEVME QELAEKITKL DEKIKQEPKI IKGGSVRKRR RRFLKKLRHQ LSNDLIPRAQ KYERAENIFQ GRNSYSKTDH DATFMCMKED PMMNRELKPG YNLQIATHKQ FVLDYGLFSN PTDTRTLVPF LTQFHALDFF EHIVADAGYG SEYNYTMILD RFEKQPVIPY TTYQKEQKRK FKNDPTRSQN WEYNANDDYY IDHQGVRFSF YRYSKSTDKY GFKRDFKIYR ADKHQLSVKL DELAKTPGGR QRYMKVNPTW NYYKAKVKDA LSSDEGKAIY RRRKFDVEPV FGHMKRDFGI RRTHLRGQRA VENDIGLALM ALNLTKFGQS ISRLETNFIN NLKSGL
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