Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0317 |
Symbol | |
ID | 5189704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 363033 |
End bp | 363404 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640590122 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_001270924 |
Protein GI | 148543554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.209684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAG AATTCAAGAC ATTTATTGCC CGCGGTAACG TTATTGACAT GGCAGTTGGG ATAATTGTTG GTGCAGCTTT TACCTCAATC GTAAAGTCCT TAGTTAATAA CCTTATTAAC CCCCTTATTG GTTTATTCAT TGGTCGAATT GACCTATCTA ACCTTGTTTT GACGGTCGGC GATGCTCAGT TTAAATACGG AAGTTTCCTA AATGCAGTCA TTAACTTCCT GATTATCTCC TTTGTTGTTT TCTTAATGGT AAAAGCAATC AATACATTCC GCAAAAAAGA AGATAAAAAA ACAGAAGCTC CAAGTGAAGA AGTTATGTAC CTTAAAGAAA TTACTGAACT TCTGAAAAAG AATAAAGAAT AA
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Protein sequence | MLKEFKTFIA RGNVIDMAVG IIVGAAFTSI VKSLVNNLIN PLIGLFIGRI DLSNLVLTVG DAQFKYGSFL NAVINFLIIS FVVFLMVKAI NTFRKKEDKK TEAPSEEVMY LKEITELLKK NKE
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