Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0013 |
Symbol | |
ID | 5189914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 14725 |
End bp | 15927 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640589807 |
Product | major facilitator transporter |
Protein accession | YP_001270626 |
Protein GI | 148543256 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCATC AAGGCGTAGA ATTAAAATGG CTTTTATTCG GAATGTTCCT TGGAAGTATT GGGAATAGTT TTGTCTGGCC ATTAACAACA ATTTATATTC ACGATCAGTT GCATGAGTCA TTAACTGTAT CGGGAATCGT TTTACTCTTT TATTCGGGAG CAAACGTTGT CGGAAGTTAT ATTAGCGGAA TGTTATTTGA CCGAGCTAAC CCGCGGAAAT TAATGATTGG CGGGACACTG CTAGCGACAA TCGTAATGAC TATTATGATT TTCTTCAATG GCTGGCCGAT ATATGGAATT CTTTTAACAG TTATTGGATT CTTCAATGGT TGGATTATCA CAATGGTTAA TTCTTTTGCG ACTCGTTCAG GGCGAGATGG TCGTTATGTC TTTAATATGT TGTATTTTGC CAATAACTTG GGAATGGTGA TTGGAACTAC TATTGTCGGT CCGCTTTACC AGTATGCAGA TGGTAATGTT TCACCGATGT TTTTGATTAC CACAATTCTC TATACAATGT TCTCGCTTGT TGTTATCTTT TTCTTTAAGG ATAGTCAACA GACAGTTGCA AAGACCGAAG ATGTGGAAGA TGAAGAAGAG AACAAGACAG TTAATATTAA GATGCCTCAA GCTAACTTAT GGATTAACTG GATCTTCTTC ATTGCCTTAG TTGTAATCTG GACAATGTAT GAACAATGGG CAAGTAACTT ATCAGTTTTC ATGACTGATC AAGGAATCTC AATGACGAAA TATAGTCTTT TGTGGACATT AAATGGGATT TTAATCGTTG TTTTCCAACT AGGAATTACT TGGCTTAATC GTTGGGTTAA TCGACCATAT GCGCAAGTAT TTATTGGGAT GTTTACAATT GGTTTCTCAT TTGTCCTCCT ACTTTACGCC CACTCATATA GCTGGTTTGT GGCGGCAATG GTCGTTCTGA CAATCGGTGA AGCCACTGCT CTGCCAACAA TGCCTGCTAT TGTAAACAGC CTTTCACCGG TTGCTGTTAA GGGAAAGTAT CAGGGAATTC TGAATGCATT TTCTTCTTTA GGAAAGGCAA TTGGTCCGCT ATTTGGTGGA TTGATGATTG AAGCGACCTC TTATCATATC CTCTTTATTA TTTGTGCGAT TTCAATTTTT GTAATGGAAA TAATAGTAGT CTTTGTTATT AAGATAAAAC GTGCAAAAGC AGTTGAATAT TAA
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Protein sequence | MNHQGVELKW LLFGMFLGSI GNSFVWPLTT IYIHDQLHES LTVSGIVLLF YSGANVVGSY ISGMLFDRAN PRKLMIGGTL LATIVMTIMI FFNGWPIYGI LLTVIGFFNG WIITMVNSFA TRSGRDGRYV FNMLYFANNL GMVIGTTIVG PLYQYADGNV SPMFLITTIL YTMFSLVVIF FFKDSQQTVA KTEDVEDEEE NKTVNIKMPQ ANLWINWIFF IALVVIWTMY EQWASNLSVF MTDQGISMTK YSLLWTLNGI LIVVFQLGIT WLNRWVNRPY AQVFIGMFTI GFSFVLLLYA HSYSWFVAAM VVLTIGEATA LPTMPAIVNS LSPVAVKGKY QGILNAFSSL GKAIGPLFGG LMIEATSYHI LFIICAISIF VMEIIVVFVI KIKRAKAVEY
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