Gene Lferr_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2867 
Symbol 
ID6878871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2850862 
End bp2851293 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content59% 
IMG OID642790721 
Productnucleic acid-binding protein, contains PIN domain 
Protein accessionYP_002221259 
Protein GI198284938 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAT TGCGGGTGGT ACTGGACACC AACGTGCTGC TTTCCGGCAT AGCATACCCG 
GCCAGCGTGC CGGGCAAGAT CCTGACCGCG TGGCGACATG CTTCCATCGA GGTACTGCTA
TCAGACTATA TCCTCGATGA ACTGCGCCGG GTACTGCCCC GTCTGGCGCA CCGCCATGGG
CTGACGGTGG CCGAGATGAG CGATCTGGTA GATATTCTGG CCATCCAAGC AGAACTGATC
GCCCCATGGC CTGGGTTGGA CCCGCACTTG CGCGACGACA AGGATCAACC GGTGCTGCAC
ACTCTGCTGG CCGCTCTCAA GACGTCTGGT GCTGACTACC TCATCACGGG AGACAAAGAC
CTTCTGGCGT TGGCTGATCG ATATCCTATA ATCACCCCAA TGGAATTCTG GCGGACGCAT
GGGGGAGTGT AA
 
Protein sequence
MAALRVVLDT NVLLSGIAYP ASVPGKILTA WRHASIEVLL SDYILDELRR VLPRLAHRHG 
LTVAEMSDLV DILAIQAELI APWPGLDPHL RDDKDQPVLH TLLAALKTSG ADYLITGDKD
LLALADRYPI ITPMEFWRTH GGV