| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2820 |
|---|
| Symbol | |
|---|
| ID | 6878823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2803729 |
|---|
| End bp | 2804271 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642790674 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_002221213 |
|---|
| Protein GI | 198284892 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.392247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAG AGGACGAGAA GCGGGCGCGC TGGCACGCAT GCTACGCGCA GACAGAGACA
CTGGCACCGG AACCGCTGCC TTTTCTGGCG GCGCATGCGG ATTGGCTGCC TGCCAGCGGT
CGGGCGCTGG ACCTCGCCTG CGGCCGGGGC GGGAATGCGC TGTTTCTGGC GCGACGCGGG
CTGAAGACCT GGGCATGGGA TTATGCGGAG AGTGCGGTGG CCGGGCTGCG GCAGCGGGCG
GATGGCCTAC CCCTATGGGT GGAATGCCGG GACGTGGTCA CTCACCCTCC GGAGCCGGAA
TCTTTCGATG TGATCGTCGT CGCGCATTTT CTGCATCGGC CATTGTTTCC GGCCCTGGCG
GCGGCGGCGC GGCCGGGCGG TCTGCTGTTT TACGAGACTT GGGCGGGGGC ATACGCCGGG
CGCGGGCCGC AAAATCCGGA GTACCGTCTC AAGCCGGGGG AGCTGGCAGG GGCATTTCCG
GCACTGACTT TGCTGGAATT GCAGGAGGAT GTGGATCGGG CGGCAGGGGT ATGGCGGTGC
TGA
|
|---|
| Protein sequence | MMAEDEKRAR WHACYAQTET LAPEPLPFLA AHADWLPASG RALDLACGRG GNALFLARRG
LKTWAWDYAE SAVAGLRQRA DGLPLWVECR DVVTHPPEPE SFDVIVVAHF LHRPLFPALA
AAARPGGLLF YETWAGAYAG RGPQNPEYRL KPGELAGAFP ALTLLELQED VDRAAGVWRC
|
|---|
| |