Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2809 |
Symbol | |
ID | 6878812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2794912 |
End bp | 2796456 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790663 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_002221202 |
Protein GI | 198284881 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0629727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.24519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAC TGAATCCATC GGAAATCAGT GAACTGATCC GCGCACGGAT CGCCGGCTTT GAAGGCCGTG TCGAAACGCG CTCGCAGGGC ACCATCATCA GCTTGAGTGA CGGTATTCTC CGTATTCACG GTCTGGAAGA CGTAATGTAC GGTGAGATGC TGGAACTCCC CGGCGGCCGC TTCGGGCTGG CCATGAATCT GGAGCAGGAC AATGTCGGCG CGGTCGTGCT CGGCGAGTTC TCCGGTCTCC AGGAGGGCGA CGTCGTCAAA TGCACCGGCA GAGTCATGCA GGTGCCCATT GGCAAGGCGC TTCTCGGTCG TGTCGTCAAT GCCCTGGGCC AGCCTGTCGA TGGCAAGGGT GCCATTGACG CCGAGGAGTT CGACGTCCTT GAAAAAATCG CCCCTGGCGT AATCGACCGG CAGAGTGTCG ACGAGCCCAT GCAGACCGGC ATCAAGTCCA TCGACGCCAT GGTGCCGATT GGTCGCGGTC AGCGCGAACT CATCATCGGC GACCGTCAGA CCGGCAAGAC GGCCGTCGCG GTCGATGCCA TCCTCAATCA GAAAGGCAAG GATGTGCAGT GCATCTATGT TGCCATCGGC CAGAAGGCTT CCACCGTTGC CGGCGTGGTG CGCAAGCTCG AAGAATACGG CGCCATGGAG TACACCACGG TGATCGCCGC CAACGCCTCC GAATCCGCCG CCATGCAGTA TCTGGCGCCC TATGCCGGCT GCACCATGGG GGAATATTTC CGCGACCGCG GTATGAATGC GCTCATCGTT TATGATGATC TTACCAAGCA GGCCTGGGCC TATCGCCAGA TTTCCCTGCT GTTGCGCCGT CCGCCGGGCC GTGAAGCGTA TCCGGGGGAT GTGTTTTATC TGCATTCCCG TCTGCTGGAG CGCGCCGCCC GTGTCAATGC GGATTTCGTC GAGAAGTTTA CCAAGGGCGA AGTGAAGGGC AAGACCGGTT CGTTGACCGC CCTGCCCATC ATCGAAACCC AGGCGGGTGA CGTGTCGGCC TTCGTGCCCA CCAACGTGAT CTCCATCACT GACGGCCAGA TCTATCTGGA AACCGATCTT TTCAACGCCG GTATCCGTCC CGCCATCAAC GCCGGCCTGT CGGTATCGCG GGTGGGTGGC GCGGCGCAGA CCAAGATCAT CAAGAAGCTG GGCGGCGGTA TTCGTCTGGA TCTGGCTCAG TATCGTGAGC TGGCGGCCTT TGCGCAGTTT GCATCCGACC TGGACGAAAT TACCCGCAAG CAGATTGAAC GCGGCAAGCG GGTCACGGAA TTGCTGAAGC AGGATCAGTT CTCTCCGATG TCGGTGGCGG AGCAGGGCGC GGCGCTTTTT GCGGCCAGCA GTGGTGCGCT GGACGATGTC GAAGTGGCCA ATGTACGGCC CTTCGAGAAG GCGCTGCTCG CTTATTTGAA CAGTAACAAC AAAGAGTTGA TGGCCGGAAT CGAAGAGAAG AAGGATCTGA CGGACGACCT CAAGAAGCAA CTCGACGCGG CGGTTAAGCA GTTCAAGTCC GGCTCGACGT ACTAG
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Protein sequence | MQQLNPSEIS ELIRARIAGF EGRVETRSQG TIISLSDGIL RIHGLEDVMY GEMLELPGGR FGLAMNLEQD NVGAVVLGEF SGLQEGDVVK CTGRVMQVPI GKALLGRVVN ALGQPVDGKG AIDAEEFDVL EKIAPGVIDR QSVDEPMQTG IKSIDAMVPI GRGQRELIIG DRQTGKTAVA VDAILNQKGK DVQCIYVAIG QKASTVAGVV RKLEEYGAME YTTVIAANAS ESAAMQYLAP YAGCTMGEYF RDRGMNALIV YDDLTKQAWA YRQISLLLRR PPGREAYPGD VFYLHSRLLE RAARVNADFV EKFTKGEVKG KTGSLTALPI IETQAGDVSA FVPTNVISIT DGQIYLETDL FNAGIRPAIN AGLSVSRVGG AAQTKIIKKL GGGIRLDLAQ YRELAAFAQF ASDLDEITRK QIERGKRVTE LLKQDQFSPM SVAEQGAALF AASSGALDDV EVANVRPFEK ALLAYLNSNN KELMAGIEEK KDLTDDLKKQ LDAAVKQFKS GSTY
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