Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2617 |
Symbol | |
ID | 6878616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2595967 |
End bp | 2603427 |
Gene Length | 7461 bp |
Protein Length | 2486 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790474 |
Product | Beta-ketoacyl synthase |
Protein accession | YP_002221018 |
Protein GI | 198284697 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAACC AAAAAATTGC CGTCATCGGC TACGCCTCAC GCTTGCCGCA AACGTCTGAC GCCACTTTCT GGGAGGACTT GCTGGCGAGG CGGGATCTGG TGACTCGGGT CGCAGAGGAC CGCTGGGCCA CGGCGAATCT GGAGCATCCC CAGCGCACCC ATCCGGGGAC TTCGGTGACT TTCGCGGCGG GTTCGCTGGG GGACGTAGCG GGCTTCGACG CGGGGTTTTT TCGCATTTCG CCGCGCGAGG CGGCGGCCAT GGATCCGCAG CAGCGCCTGT TGCTGGAGAT GAGTTGGGAA GCCTTTGCCC ATGCCGGAAT CGCGCCTTCC TCTTTGCGCG GGAGTCGTTG CGGCGTCTTT ATGGGTTTGG CCAGTACCGA CTACGCGTAT AGGTTGGCCG ATGATCTGGC GGCTATCGGG TCTAACTCGG CTACGGGTTC GACGGCGAGT ATTGCCGCAA ACCGGCTGTC TTACTTTTAT GATCTGCGGG GGCCGAGTCT GGTGGTGGAT ACGGCCTGCT CATCGGCGCT GGTAGCCTTT CATCAGGCCT GCCAGTCGCT GCTGCGCGGT GAGAGCGAGT TGGCGCTGAC CGGAGCCATC AGCCTGCATC TGCATCCTTA TGGCTTTCTG ATTTTTTCCA GGGCATCCAT GCTCTCGGCG AGCGGCCGCT GCCGACCCTT TGACGCTGCG GCCGATGGCT ATGCGCGTGC GGAAGGCGGC GGGGTCTTCG TGCTCAAGGG CTATGATAAG GCCCTGCGCG ATGGCGACCG GATCCTGGCG GTGGTGACCC ATACCGCCAT CAACACCGAT GGCCACAAAG GCGGACTGAC GATTCCCAAC GTCGACGCCC AGGCCCAGCT TTTGGAAGAG GCCTATGCTG CGGCGGGTAT CCACCCTGAG GCGATCGACT ACGTTGAGGC CCATGGTACG GGAACCACGG TGGGCGATCC CATCGAGGTG GCGGCCATTG GACGGGCGCT GGGCCGCCAT CGCGACCCTC GGCACCCGCT GCCCGTTGGT TCGGTAAAGA GCAATCTGGG CCACCTGGAG ACCGCTTCCG GCGTGCCCAG CCTGATCAAG GCCATTCATT GCCTGCAGAA ACGCCGGGTG CCCGCCACCA TCGGCGTGGA GCGTCTCAAC CCACGGCTGG AATTGACGGA AAACCGCCTG GAGGTGGTGA CGGAGAACCT CGCCCTGAAA GGGGAGGGAC GGCTGGTGAT CGGCGTGAAT TCGTTCGGTT TTGGCGGCGC CAATGCCCAT GTGATCCTCG AAAGCGCTGA GTCGGTACAG GCGGAAGAAG ACACTCCTGC GCCCGACGCC CCCCGCCCCC TACCCCTGGT ACTGACGGCG GCGACCCCTG CGGCGCTCCA GCAGGTGGCG GGGGATCTGG CCCGGGTTTT GGCGGCGCAA CCGGAGACCT CCTGGTACGC CACGCTGTAT CAGGCCACTT TTCGCCGGGA CTGGCTGCGT CACCGAGCGA TTTTTTGGCA CGAGGGCCAC CATGGCCTTG TGGACCATCT GGCTGCCTTC GCCGCCCATG ACGACAAAAG CGGGGGGATC GTCATGGACA CCGCCCTGGC AGATCCCCAG GGTCCGGTTT TTGCGTATTC CGGAAACGGC TGCCAATGGT TCGGCATGGG TCGTTCGTTG CTGTCCGAGC CGATATTCCG ACAGGCCATC GAAGAGATCG ATGCCTTTTT CTTCCCTCTG GCGGGGTATC GTCTCGTCGA TGATCTGGCG GGGTCTTTGG GCGAGGATCG CTATGCCCTG ACCGGGCATG CCCAGCCGGC CCTTTTTGCC CTGCAGGTCG GCATCACCCA AATGCTGCGC TCCTGGGAGG TGCGGCCGGT GGCGGTAACT GGTCATAGCG TGGGAGAAGT GGCGGCGGCA TGGGCCTGTG GCGCCTTGGA CCTGGAGGAT GCGGTTCGGG TGATTTTCCA TCGCAGCCGT TTGCAGGAGC AGAGCCGGGG GCAGGGGCAG ATGACGGCGG TGGCTTTGGC TGCCGACGCG ACGCGGAAGC TGCTGCGGGA ATGGGATCTG GCGGAAGTGT TGCACATTGC GGCCTGGAAC AGCCCGCGCG GCGCTACCGT CGTCGGCCCC ACGGTGGCCT TGAGCGAGAT GGAGGCTCGC CTGCGCGCGC AAGGGACTGC GTGTAAGCGT CTGGACATCG AGTATCCCTT TCATAGTCCC GTGATGGAAA ATGTCCGGGA AGAACTTTTC GGTGCTTTGT CCGGATTGCG ACCGGGCAGG GCCCATATCC CTTTCTACTC TTCGGTCAGC GGTGCCAGCC TACCGGGGGA AACCCTCACC GCGGACTATT GGTGGGCCAA CATCCGCGAC CCCATCCGTT TTCAACAGGC CACGGAACAG ATGCTGGCCG GCGGCTTCAA TGTCTTTGTA GAGCTGGGAG GGCATCCGGT TCTGCGCGGC TATCTACAGG ATGGCTTGAC CCAGGGCGAA CGGGAGGGGC GTATCATCGC CACGTTGCGG CGCGGCGATG ATCATCCGCA ACGGATTTTG GCGGCGGTCC AACAGGTATT CATTACCGGG GTTCCGGTGG AATGGCCACG TTTTTACCCC AAGCCTGGTC CTTTTGTGGA TTTGCCTCAT TATCCATGGG AGCGGGAACG CTACTGGCAC CCGGTCACCG CAGAATCTGC CGGGACGCTC TATCGATACC CGGTGCATCC CCTCCTGGGG CATCCCGTGC CCCAGCATGA CCATGAGTGG GAGCAAGACA TCGATACGGC CCGCTTGCCT TTTCTGGCGG ATCATCGGGT TGGGGAGGGT GTGATTTTCC CTGGCGCGGG TTATGTGGAG CTGTTTCTTG CGGCGGCCCG TCAGCGGGGC GATGAAAGCG CGCTCCTGGT GCTGGAAGAT TTGGAGATAT GGGCGCCTCT ATCGTTGAAC GAGGAAAGTG GCAAGGTTTT GCGGGTGACT TTGGATGCGG CCAGTGGCGA GGTCCAGGCC CTCTCCCGCG ACCGCCTCGC CCAGGACTGG ACGCTGCACG CCAAGGCCCG CATCGTTGCG GAGCGGACGG ATCTGCGCCT GCGTCGGCCG GCCATGGAGA GGCCCGAGGG CGCACCGGAC TTTGATGGAG AACAACACTA TCGCCTCGCG GAATCCGTTG GGCTTCTCTA CGGGCCGAAC TTCCGGACGG TGACCCAAGG CTGGGTCCGT GGTGATGCGG TGTGGGCGGC GATGGCCTTG CCCTCGGACA TCGCCGCCTT CGAGTCCGGC TTTCACCTGC ATCCGGCGCT CCTGGACGGC GCTTTTCAGC TTGTCATCGA CCTCTTGCGC GACAATATCG TCGACCATCC GGGAGTGGCG TTCGTACCCA TTCGCATGGG CAGGATCACG CTACGGCAAC CGCTGACCCA AGTGGCCTGG GCCGGCGCGC GATTGCTCCG CCGTTCGCCC CAATCCATCC TGGCGGAATT CACCCTGATG GATGCCGCGG GAACGGTGGT CGCGCTGTGC GAAGGGGTAC GCATGCGGCA GGTGAAGTTG CTGCGTACTC CGGATGAGCC ATTGAGACTC ATCGGCACGG AACTCGTCGC CATGCCGCGC CGGGAAGCGC TGCAAAAGGC ACCCCCCTTG CCCGTCGCGG CGCTGGCGGA GGCATTGCAG GCGGCTCTGG GGAGGGGGGA CGTTCAGCAT GCCCTGGGCC GCTATCGGGA CGAATATGCA CCCCTTCTGG ACGCGCTGCT CCAGGCATTT CTGCGCGAGA GCTGGGGCGA GGCCGTAGCA GAGACCATGC CTGCATTTGC TGACGAAGAG CCCATTTCCG CCGGGCAGAT TTGGGTGACC TTGATTCGGG ACTATCCGGA ATTCTCTGCC CTCACCCTAC AGGTGGGGCG CGCGGGCATG GCGCTTGCCG CCTCTTCCGC GAACGATGGG GACGATGATC GCGCGGCTGC ACCGCCCCTG GATCCCGACC TTTGGGTCAG GACTATCCTG CAAACCATCG ATGGCCCCAT CCACGCGGCA GTCACGCGTT TTATGCAGGA ACGATGCGCC CAACTAGCCC CCTCCTCCCG CCTGGGGATC ATGGAGATCA ACGCCCATGG GCCTGATTGG ATAGTGCAGG TGGCGGAGGC CCTTTCCGGG GAAAATCGCT GCGACCTGTA CTACGCGGGT CCCGGCGCAG AGATTCTGGA GTCCCAGGCG GAGATGGCCC GCGAGGCCCA ATGGCAATCC CTGGCCATTC CCGCGGCGGG CACCTTATCC GCGCCAGACC CACGGCCCAC CGTGCATTTC GCCTGGATGC AGGTGGACGG GGATGCGGAT ACCACCGCAC AAATGATCCA TATGGCCCAG GACTGCCTTG CGCCCCAGGG GTTGCTGTTT TTGTTGGGCG TGCATCCTGA GCCCTGGATG TCGGCCCTGG CGGAGTGTCG GGATGCCGAC GCCGGACAGT CTCTGACCGA AGCCCAACTG CAGGCGAATT TGCAGCAGAT GGGCTTCGTG GACGCTCGAT CATTGGACCA GGATAATGCG CTGCGCACGG GTCCCTACCT GCTTCTCGCC AGGAAAAGTG AGGATGCCCT TCCGACTGCC CAGACCGAGC CGGGCGGCAA GGGCCGGTGG CTATTGGTGG GGGACAAGGC GTGCGGCGAT GACCACCAGT CCCCCTGGAT GGCGGCGTTG AAATGGGGAT TTGCCCAGCA AGGCTTCAGA ACGATCACGC TGGAGGCGGC GAGCGTGCAG GAACTGGAAG ATTCCCTGCG CGTTCTGTTC AGGGAAGAGG TGGGTGCTTG GGAGGGTGTC CTGTATTTCC CCGGACTCTT TCCGGCCCCG GACGAGATGT CCGTGGGCCG CTTGCTGGGG GAGCAATGCC AGAGTCTGCG CACCCTCAGC CAGTGGGCCT TGGGCCAGGA GGAGCCACCC CCGGTATGGG TGCTCACCCG TCATGGCCTA TCGACACTGT ACCCTTCTCC CCTGCCGCCC GCCATGACGG ATGGGATGGT GCAACCCCTC CACGGAGCGG GCCTCACCGG CTTTGCGCGA ACCCTGCAAA ACGAACTGCC GGAGCTCGCC CTGCGCGTGC TGGACCTGAC CGAGAGCGGG CCCACCCCCC CATTGCTGGA ACATCTCGTG CGGGAATGCG TCTGTCCCGA TAGCGAGACG GAAATCGTTC TGGACGGACA TGGGGGCAGG TACGCACCGC GGGTGCGGGA GAAACCCGCC CTGGAGATCA CGACCAGAGC GCCTCGGCAA CTGCGTTTTG CCGCGCCGGG GCAGTTACGC AATCTTCATT GGGCACGTTT TAACCCTCCG GACCTGGCGG AAGACGATGT GGAGGTGCTG GTCGGCGCCA CGGGCTTGAA TTTTCGGGAC GTGATGTACG CCTTGGGGAT GCTGTCGGAT GAAGCCTTGG AAAACGGCTT TTCAGGGCCG GGCCTGGGAC TGGAGTTCGC CGGGACGGTC GGTCGAGTGG GAAAAGGAGT CTCCCATGTA GCGCCGGGCG ATAGAGTGGT GGGCTTTGCT CCCGCCAGCT TCGCCACCCA TGTGGTCACC AAGGGCTATG CGGTCACGCG GCTGCCCGAG CATCTGGGTG TGGAGGCCGC GGCCACGATC CCGACGGCCT TTCTCACCGC CTGGTATGCC TTGATGGAAC TGGCTCGCTT GCAGCCGGGG GAGCGGGTCT TGGTCCATGG CGGCGCGGGT GGCGTGGGTA TCGCTGCGAT TCAGATGGCC CAGTGGCGGG GCGCCGAAGT ATATGCCACG GTGGGCTCGC CCGAGAAGCG GGATTTTCTA CGCCTCTTGG GGGTGAGCCA TCTGTACCAT TCCCGGTCTT ACGACTTTGC CGAGGAGATC TGGCGAGACA CGAACCAGGA AGGAGTAGAC GTGGTGCTCA ATAGTCTCTC CGGTGAGGCC ATTCGCCGCA ATCTGCAGAT ATTGCGTCCC TTCGGGCGAT TTCTGGAACT GGGCAAACGC GACTTCTACG AAAACACGGC CATGGCTTTG CGCCCTTTCC GCAATAACCT CAGTTACTTC GGGATCGACG CGGATCAGTT GATGCAGCTA CGCCCCACGC TGACCCAGGA AATGTTTGGC CGGGTCATGG AGCGTTTTGC CGCTGGGGAT TTTTTTCCGC TGCCCTATAC CTGCTTTCCG GCCCGCTCGG TCGTCCCGGC CTTCCGTCAT ATGCAGCAGG CACGCCAGAT CGGCAAGATC GTGGTGACCA TGGAGGAGCC CCTGCTCCCT GTGGTGAATG ATAACCGCCT CCGTGGCGAA CCGCTGCAGC TTGCCGCGGA TGGGGTCTAT CTGGTGACCG GGGGGCTTTC CGGTTTTGGT CTGGAAACGG CACGACGCCT GGCGGAGCGC GGCGCCCGCA AGCTCGTGCT GATCTCGCGA TCCGGCCGGA TGGATGGGCA TGCCCAGGAG GCGATGACCC TCATGCGCTC ATGGGGCGTG GAGATCCTGG CGTTGCGCTG CGATGTCACC GATCCCACCC AGTTGGCCGA TCTTTTTGCG CGCATAGCGC TGGAATTGGG TTCATTGCGG GGGGTCATCC ATGCCGCGGC AGTCATCGAC GACGCGTTGG CGCAGAACCT CAGCGAGGAA CAAATCCAGC GGGTCTTGGC CCCCAAGGTA CAGGGCGCGC TCCATCTGCA CCACCTCACC CAAACCCTAC CCCTGGATTT TTTCGTGCTC TATTCTTCGG TGACGACGAT TCTGGGGAAC CCAGGGCAGG CCCATTACGT GGCCGCGAAC ACCTGGATGG AAGCCCTGGC CCGGCAGCGG CGCGCCCAGG GTTTGCCGGC CACCGCCATA TTATGGGGCG CCATTGGCGA TGTGGGTTTT TTGGCGCGCA ACAACAAGAC CAAGGAGGCC CTGCAGCAAC GTCTGGGCAG CGCCCCCATG TCGTCGCGGG CGGCCCTGGA TTGGCTCGAG GAGATCCTGG CCAGGGACGT GAGCGGCGAT GCGGTGGTGG ATTGGGATTG GCGTGCGATT CGCCGTTTTC TGCCCATCGC GCAGTCCCCC AAGTTCTCCC CGTGGAATCT GGACATGGGT CATGACGAGT CGGCGGATTC CACCGACGAG GATCTGTGCG GATACCTGCT CTCTCTGCCG GATGACGAGG CGGTCTCCGC CATCACGGAT CTCCTCCGTC GGGAAGTCGC GGAGATTTTG CGCCTGCCCA TGGAAAAGAT CGAAGCTGCC CAGAGCCTGT CCCAAATCGG TCTGGACTCC CTCATGGGCG TGGAACTGGC CTTGGCGCTG GAACAGCGCC TGGGCGTCAA GCTCCCCTCC CTGCTGCTCG CCGAAGGACC AACGCCGGCC AGACTCGCCG ATCGCGTGCT TCAGGAGTTG CGCAAGAGAC AAGGCTCAGG TGAAGATCCG CAGGTCGCGG CGATGGACGA GGAAGATGTG CGCCGACTGG CGGGGCTGCA CGGCGTCGAG GCCCAGGCAC CAGCCCTGGA TGGATGGGTC ATGAATGGGG AGGGGCGCTG A
|
Protein sequence | MRNQKIAVIG YASRLPQTSD ATFWEDLLAR RDLVTRVAED RWATANLEHP QRTHPGTSVT FAAGSLGDVA GFDAGFFRIS PREAAAMDPQ QRLLLEMSWE AFAHAGIAPS SLRGSRCGVF MGLASTDYAY RLADDLAAIG SNSATGSTAS IAANRLSYFY DLRGPSLVVD TACSSALVAF HQACQSLLRG ESELALTGAI SLHLHPYGFL IFSRASMLSA SGRCRPFDAA ADGYARAEGG GVFVLKGYDK ALRDGDRILA VVTHTAINTD GHKGGLTIPN VDAQAQLLEE AYAAAGIHPE AIDYVEAHGT GTTVGDPIEV AAIGRALGRH RDPRHPLPVG SVKSNLGHLE TASGVPSLIK AIHCLQKRRV PATIGVERLN PRLELTENRL EVVTENLALK GEGRLVIGVN SFGFGGANAH VILESAESVQ AEEDTPAPDA PRPLPLVLTA ATPAALQQVA GDLARVLAAQ PETSWYATLY QATFRRDWLR HRAIFWHEGH HGLVDHLAAF AAHDDKSGGI VMDTALADPQ GPVFAYSGNG CQWFGMGRSL LSEPIFRQAI EEIDAFFFPL AGYRLVDDLA GSLGEDRYAL TGHAQPALFA LQVGITQMLR SWEVRPVAVT GHSVGEVAAA WACGALDLED AVRVIFHRSR LQEQSRGQGQ MTAVALAADA TRKLLREWDL AEVLHIAAWN SPRGATVVGP TVALSEMEAR LRAQGTACKR LDIEYPFHSP VMENVREELF GALSGLRPGR AHIPFYSSVS GASLPGETLT ADYWWANIRD PIRFQQATEQ MLAGGFNVFV ELGGHPVLRG YLQDGLTQGE REGRIIATLR RGDDHPQRIL AAVQQVFITG VPVEWPRFYP KPGPFVDLPH YPWERERYWH PVTAESAGTL YRYPVHPLLG HPVPQHDHEW EQDIDTARLP FLADHRVGEG VIFPGAGYVE LFLAAARQRG DESALLVLED LEIWAPLSLN EESGKVLRVT LDAASGEVQA LSRDRLAQDW TLHAKARIVA ERTDLRLRRP AMERPEGAPD FDGEQHYRLA ESVGLLYGPN FRTVTQGWVR GDAVWAAMAL PSDIAAFESG FHLHPALLDG AFQLVIDLLR DNIVDHPGVA FVPIRMGRIT LRQPLTQVAW AGARLLRRSP QSILAEFTLM DAAGTVVALC EGVRMRQVKL LRTPDEPLRL IGTELVAMPR REALQKAPPL PVAALAEALQ AALGRGDVQH ALGRYRDEYA PLLDALLQAF LRESWGEAVA ETMPAFADEE PISAGQIWVT LIRDYPEFSA LTLQVGRAGM ALAASSANDG DDDRAAAPPL DPDLWVRTIL QTIDGPIHAA VTRFMQERCA QLAPSSRLGI MEINAHGPDW IVQVAEALSG ENRCDLYYAG PGAEILESQA EMAREAQWQS LAIPAAGTLS APDPRPTVHF AWMQVDGDAD TTAQMIHMAQ DCLAPQGLLF LLGVHPEPWM SALAECRDAD AGQSLTEAQL QANLQQMGFV DARSLDQDNA LRTGPYLLLA RKSEDALPTA QTEPGGKGRW LLVGDKACGD DHQSPWMAAL KWGFAQQGFR TITLEAASVQ ELEDSLRVLF REEVGAWEGV LYFPGLFPAP DEMSVGRLLG EQCQSLRTLS QWALGQEEPP PVWVLTRHGL STLYPSPLPP AMTDGMVQPL HGAGLTGFAR TLQNELPELA LRVLDLTESG PTPPLLEHLV RECVCPDSET EIVLDGHGGR YAPRVREKPA LEITTRAPRQ LRFAAPGQLR NLHWARFNPP DLAEDDVEVL VGATGLNFRD VMYALGMLSD EALENGFSGP GLGLEFAGTV GRVGKGVSHV APGDRVVGFA PASFATHVVT KGYAVTRLPE HLGVEAAATI PTAFLTAWYA LMELARLQPG ERVLVHGGAG GVGIAAIQMA QWRGAEVYAT VGSPEKRDFL RLLGVSHLYH SRSYDFAEEI WRDTNQEGVD VVLNSLSGEA IRRNLQILRP FGRFLELGKR DFYENTAMAL RPFRNNLSYF GIDADQLMQL RPTLTQEMFG RVMERFAAGD FFPLPYTCFP ARSVVPAFRH MQQARQIGKI VVTMEEPLLP VVNDNRLRGE PLQLAADGVY LVTGGLSGFG LETARRLAER GARKLVLISR SGRMDGHAQE AMTLMRSWGV EILALRCDVT DPTQLADLFA RIALELGSLR GVIHAAAVID DALAQNLSEE QIQRVLAPKV QGALHLHHLT QTLPLDFFVL YSSVTTILGN PGQAHYVAAN TWMEALARQR RAQGLPATAI LWGAIGDVGF LARNNKTKEA LQQRLGSAPM SSRAALDWLE EILARDVSGD AVVDWDWRAI RRFLPIAQSP KFSPWNLDMG HDESADSTDE DLCGYLLSLP DDEAVSAITD LLRREVAEIL RLPMEKIEAA QSLSQIGLDS LMGVELALAL EQRLGVKLPS LLLAEGPTPA RLADRVLQEL RKRQGSGEDP QVAAMDEEDV RRLAGLHGVE AQAPALDGWV MNGEGR
|
| |