Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2365 |
Symbol | |
ID | 6878361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2337855 |
End bp | 2338538 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642790226 |
Product | protein of unknown function DUF484 |
Protein accession | YP_002220773 |
Protein GI | 198284452 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.108305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000169554 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTACGG AGCCTGAACT GGAAACACAG GCGGATCAGG TCCTGGCCTA TCTCCGTCAG CATCCGCAAT TTTTGTGGGA TCAGGAAGAC CTGCTCCACA CCTTGACCCT GCCCCATGTC GGACGTGGTT CCGCTTCGTC CCTGCTGGAG CGGCAGGCGC AGGTGCTGCG CGAAGAAAAC CTCCGGCTGC ATCAGCGTAT CAGCGCGCTG CTGGGTGCCG CCCAGCAGAA TGCCGCACTC GGCCTGCACC TCTCCGATCT GGCTACCGAA CTGTTGCAGA CACCCGACTG TACCACGACC GTCAATACCG TCATCACCCG TCTGCGGGAG GGTTTTCAGG TGGAGGAAAT GGCCTTGATC GCCCGCGCAC CCGTGGCCGG ACTGCCCCAG TTCCTACCGT TGGAGCAGGC TGATTTTCAG GAGATTCTGA ACGGCCTACC GTTGTTGCGC GCCGCAACCG GGCTGGCCCT GAGCCCGACC CTGCGCAGCA CCCTCTTCGG CGCGGCAGGG GCGGGACTGG CGTCCTTCGC CCTGATCCCG CTTGCCGGTC GGCATCTGCA AGGAGGGATT CTGCTCGGCA GCCAGCACCC CGACCGCTAT GCCGAGGACG CCGGGGCCGA CCTGCTCGAC CAGATTGCCC GCCTGGTCAC GGCGGCACTG GATCGCTGCC TGGCCCCATG CTGA
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Protein sequence | MATEPELETQ ADQVLAYLRQ HPQFLWDQED LLHTLTLPHV GRGSASSLLE RQAQVLREEN LRLHQRISAL LGAAQQNAAL GLHLSDLATE LLQTPDCTTT VNTVITRLRE GFQVEEMALI ARAPVAGLPQ FLPLEQADFQ EILNGLPLLR AATGLALSPT LRSTLFGAAG AGLASFALIP LAGRHLQGGI LLGSQHPDRY AEDAGADLLD QIARLVTAAL DRCLAPC
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