| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2314 |
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| Symbol | |
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| ID | 6878308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2288485 |
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| End bp | 2290446 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790173 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002220722 |
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| Protein GI | 198284401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.682449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC GGAGATCATG CTGGCGGACC CCTGTGCGGC ATCCGGGGAA TACCCGTTGG
GTACTGGCCT GCTGGATGCT GATCGGTATC CTGCCGGGGG CATGCGCGGG ATCGCTGACG
CAGAATGATG CGGATGGCGC CGGACTGGGT TCAGCGCTGA TGAACGCATT GCCGGCATCA
CCGGAAACCG TCGCCCCTGG CCTGCTCCCA CCGCCACCAG CGCGACCACA GGCACAGGCA
CAGGCACAGG CTCAGGCTCA GGCTCAGGCT CAGGCTCAGG CTCAGGCACA GGCACAGGCA
CAGGCACAGG CACAGGCACA GGCACAGGCT CGGCGGGCGG TAAAAAAGCG TTCGCCGGTC
GGACCCGCGC CAATGTCTCC GGCGTCGACA GCGATCCGGA CACCAGCGGC ACCGCCCCCC
ACGGCAAGCG TTGCGTCGGC GCTGTCCTCC GGGCATGGGG CAACCAAAGC CCGAAACTCC
GCCGCGAACG CGGGTACCCG TCCGGCGGAT CATGGGGCCG CCGTAACCAT TACGGCACCA
CCCGCACCTG CTCTGCCGGA CCTCCATGCC ACCGCCCATT CGTCAGCGGC GCCTGCGGGA
GCCTTGGCGG CGGGTGGCGG TAACAAACTG CACGAGTTGC TGGCTACCGC CCTGGCCAAC
AATTCCGATA TCCGGCTGGC CGATCAGTCG CTGCGCGAGG CGCAGGCCGA GTCGCTGGAT
GCCTTCGGGC AGTTTTTACC GCATCTGAAT TTTCAGACGC AAACCCAGTT ATACGGCAAT
CAGACCAACC AACCTTCGGT GTCGCTGATC GGTTCCACCA TCGTGGTGAC CCAGGGCAAT
AACTATTCCA ATTATCTCAG CGTGATGGCC AGCCTGAATC TGTTCGAAGG CGGACAGGGG
ATTGCCAATC TGGCGGCTTC CCGTCAGGGT GTCCATGCCG GTCACGAACA GGTGTCCGAG
CGGCGCATGC GCACCGCTCT GAATGTGCTG GCTGGCTACG AAGGGTTACA GAGTCTGCAG
TGGCAATTGC GGGCGATCAA GCGGTCTCTG GTGTTCATGC GTCAGGACCT CGCCCTGGCC
GAGCAGCGCG TGCGGCAGGG AAACGAAAGC CGGATCGATT TGAACCAGAT GCGGAGTCAG
GTCGCGAATC TGGAAGCGCA GCGCCAGGAT ACGGAAAAGC GACTGCTCAA GGCGCAAACG
AATCTCGCCC TGCTCATGGG CAAAACCGGA GCTTTCGATC TGTTGCAATC AGGCGTGCAT
GACCGCATAC CCACCCCGCC GGAATTCGAT GCCGCCGCCG TGGAGGGTGT CGCCGTGGAC
AACCTGCCGA GCGTGCAGGT CGCCCGTGCC GCACTGCACA AGGCGCGGGA CCGGGTGGAT
GCGGTGCGCG GCTCCTTTCT CCCGAATGTG AATCTGCAGG CAGGGTACAA CTGGATCGGC
ACCTCCAGTC AGGGGTTTGG CCGAGCGATC GGCTCCACGT CGCCCAGTAA TTATACGGTG
GGCATTTCCA TTACCCAGAC TCTCGCACCG TTCACCGGCC ATATGGCCAA GCTGGATACC
GCGGAGGCGC AGTCGGAAGC GGCGCTGATT CGTTATCAGC GGGCGCTGCA GGAAGGGCGT
CAGGAACTGC GAGTGAATCA GGAGGAAGTG CGAGCCGATA CCGCCCGCTT GGCCGCGCTG
GAGAGCGTCT ATGCCCGTGC CCGGCAAAAT CAGAAACTGA TGGAAGATCT TTACGCACAC
GGGCGTATCA GTAAAACCGA TCTGCACGCC GCGCAAATCA AGACCATGAA TGCCGGGGAT
GCGTGTCGGG ACGCCCGTGC GCAACTGCAC GTGGCCCGCT GGATGTTGTA CGCCATGGTG
GATCCGCGGC ATGTTGCCGA CAGCCTGCTC CAGAAAACAC AGGCTGAAGG GGTCGACAAT
GCCGCGCCGT CGTCTTCGGG AGCGGGCGCT GAACATGCTT GA
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| Protein sequence | MKKRRSCWRT PVRHPGNTRW VLACWMLIGI LPGACAGSLT QNDADGAGLG SALMNALPAS
PETVAPGLLP PPPARPQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAQA RRAVKKRSPV
GPAPMSPAST AIRTPAAPPP TASVASALSS GHGATKARNS AANAGTRPAD HGAAVTITAP
PAPALPDLHA TAHSSAAPAG ALAAGGGNKL HELLATALAN NSDIRLADQS LREAQAESLD
AFGQFLPHLN FQTQTQLYGN QTNQPSVSLI GSTIVVTQGN NYSNYLSVMA SLNLFEGGQG
IANLAASRQG VHAGHEQVSE RRMRTALNVL AGYEGLQSLQ WQLRAIKRSL VFMRQDLALA
EQRVRQGNES RIDLNQMRSQ VANLEAQRQD TEKRLLKAQT NLALLMGKTG AFDLLQSGVH
DRIPTPPEFD AAAVEGVAVD NLPSVQVARA ALHKARDRVD AVRGSFLPNV NLQAGYNWIG
TSSQGFGRAI GSTSPSNYTV GISITQTLAP FTGHMAKLDT AEAQSEAALI RYQRALQEGR
QELRVNQEEV RADTARLAAL ESVYARARQN QKLMEDLYAH GRISKTDLHA AQIKTMNAGD
ACRDARAQLH VARWMLYAMV DPRHVADSLL QKTQAEGVDN AAPSSSGAGA EHA
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