| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2308 |
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| Symbol | |
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| ID | 6878302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2282264 |
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| End bp | 2284498 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642790167 |
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| Product | Haemagluttinin domain protein |
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| Protein accession | YP_002220716 |
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| Protein GI | 198284395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACTT TCAGAAAAAA AATCCTATTC GTGGCCGTAT CCGGCACCTT TGCAATATCC
ATGGCGGGGG GGGGCACGGC GGATGCAAGC ACCGTCCAAG GTGGTGTCGG CCTGGTGGCG
GCCCTCACCC AAACCCTGGG ACTCGGTTCG GCGGTCACCC AGTACGGTGA CAGCAACAAT
ATCGCATCGG GACCCGGCAG TGCCGCCGGT ACCAATGATA CGGCCGTGGG CGTGAATGCG
ACGTCCACCG GCACCAACTC CGTGGCCCTC GGCTACAACA GCAGCGATGG TGGGCAAAAC
AACGTCGTAG CGGTGGGTAG CGCCACCCAG CAGCGCAAGA TCATCAACGT GGCGCCGGGC
ACCCTGAGCC AGACCAGCAC GGATGCGGTC AACGGCAGCC AGTTGTATGC CACAGACCAA
CAGCAACTGA CCAATACCAG CAATATCAGC AATCTCCAGA ATCAGCAGAA GATCGATCAA
ACCAATATTT CCCACTTGCA ATCGACGGTC AGCAATATCA GCAACCTGAC CTCGGTGGCC
GGTGACCTCA CCGCCATCAA GCAGCAGCAG CAGACGGATA TGAGCAATAT TGCCGTCAAC
ACTTCCGACA TCAGCAACCT CAAGGGTCAG CAGGGCACCG ACGTCACCAA CATCAGCAAC
CTGCAGAAAC AGCAGGCCAC CGACGTCAGC AATATCGCCA ACAATACCAG CAACATTGCC
AGCAATACCT CCAATATTGC CGTCAACACT TCCGACATCA GCAACCTCAA GGGTCAGCAG
GGCACCGACG TCACCAACAT CAGCAACCTG CAGAAACAGC AGGCCACCGA CGTCAGCAAC
ATCGCCAACA ATACCAGCAA CATCAGCAAT CTGAGCAACG TGGTCGGGGG CTTGACGTCA
ACGGCAGTCG ATCTCACCAA AATCAAAAAA CAGCAAGCCA CCGATGTCAC CAATATCGCC
AGCAACACCA GCAACATCGC CAGCAATACC TCGGACATCA GCAACCTGAA AAATCAGCAG
GGCACCGACG TCACCAACAT CAGCAACCTG CAGAAACAAC AGGCCACCGA CGTCAGCAAC
ATCGCCGGCA ACACCACCAA TATCGCCAGC AACACCTCCG ACATCAGCAA CCTGAAAAAT
CAGCAGGGCA CCGACGTCAC CAACATCAGC AACCTGCAGA AACAACAGGC CACCGACGTC
AGCAACATCG CCGGCAACAC CACCAATATC GCCAGCAACA CCTCCGACAT CAGCAACCTG
AAAAATCAGC AGGGCACCGA CGTCACCAAT ATCGCCAGCA ACACCAAAGA CATCAAGAAC
ATCAAGACGC AACAGGCTAC CGACGTCAGC AACATCGCCA GTAACACCAC CAATATCGCC
AGCAACACCT CCGACATCAG CAACCTGAAA ACCCAGCAGG GTACCGACGT CACCAATATC
GCCAGCAACA CCAACGACAT CAAGAACGTC AAGACGCAAC AGGCTACCGA CGTCAGCAAC
ATCGCCATGA ACACCAGCAA TATCAGCCAG TTGCAAACCA TCGTCAACGG CAAAGTCGCC
ACCTGTCAGG TCGTCAACGG CGGCCTGCAG TGCACCTACG CCCAGGCCAA GGGTACGAAC
GACGTGGCAG CAGGAAACGG GGCGCTCGCC AACGGCACCA GCAGTATCGC CATCGGTACC
AACGCCACGG CAACCTACAA CGGCGCGGTA GCCATCGGTG ATGGTGCCCG GGCGGTGGCC
GATCCCGCGA CAGCCATTGG TGCCAACGCT CAGGCCAATG CCAACAATAG TACGGCTATC
GGTGCCAACA GCACGGCCAA CGGGATCAAT TCCGTTGCCC TGGGACAAGG TTCCACCGCC
AATCGCGCCA ATTCCGTTTC CGTGGGCAAC GCCTCTACCG GGCTGACGCG ACAGATCACC
AATGTGGCCC CCGGCACCAC ACCCAATGAT GTGGCCACCG TCGGTCAGTT GCAGGGTGCC
GTCGGGCAGG CGCAGCATTA CGCGGCCCAA GTGGGCTCCG TCAATGCCGC AGCCCTGAAC
GCCGCCGCAT CCGCCGCATC CGGTCAGGGA CCCAACACGG TGGCCGGCGG TTATGGTGAG
TACGATGGAC AGAGCGCATT CGCGTTTACA TATCAGCACC GCTTCAACTG CAACTGGCAG
GCGCTGTTGA CGGTGGGCAG CAACGGTTCG GGCAAAAATA CCGAAGTGGG CGCGGGAGCG
TCCTACAGTT GGTAA
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| Protein sequence | MSTFRKKILF VAVSGTFAIS MAGGGTADAS TVQGGVGLVA ALTQTLGLGS AVTQYGDSNN
IASGPGSAAG TNDTAVGVNA TSTGTNSVAL GYNSSDGGQN NVVAVGSATQ QRKIINVAPG
TLSQTSTDAV NGSQLYATDQ QQLTNTSNIS NLQNQQKIDQ TNISHLQSTV SNISNLTSVA
GDLTAIKQQQ QTDMSNIAVN TSDISNLKGQ QGTDVTNISN LQKQQATDVS NIANNTSNIA
SNTSNIAVNT SDISNLKGQQ GTDVTNISNL QKQQATDVSN IANNTSNISN LSNVVGGLTS
TAVDLTKIKK QQATDVTNIA SNTSNIASNT SDISNLKNQQ GTDVTNISNL QKQQATDVSN
IAGNTTNIAS NTSDISNLKN QQGTDVTNIS NLQKQQATDV SNIAGNTTNI ASNTSDISNL
KNQQGTDVTN IASNTKDIKN IKTQQATDVS NIASNTTNIA SNTSDISNLK TQQGTDVTNI
ASNTNDIKNV KTQQATDVSN IAMNTSNISQ LQTIVNGKVA TCQVVNGGLQ CTYAQAKGTN
DVAAGNGALA NGTSSIAIGT NATATYNGAV AIGDGARAVA DPATAIGANA QANANNSTAI
GANSTANGIN SVALGQGSTA NRANSVSVGN ASTGLTRQIT NVAPGTTPND VATVGQLQGA
VGQAQHYAAQ VGSVNAAALN AAASAASGQG PNTVAGGYGE YDGQSAFAFT YQHRFNCNWQ
ALLTVGSNGS GKNTEVGAGA SYSW
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