Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2268 |
Symbol | |
ID | 6878262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2244221 |
End bp | 2245498 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642790128 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002220677 |
Protein GI | 198284356 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000790728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCGG TGCAGGCAGC CGCCGGGGCC TATCAGCGGG GAATTGCCCG CAACCGTGGC CAGTTTCTGC TGCAAACCTC GCAGGTCTTT TTTGTCGGTT TGATCATCGG CATGGAGCGC ACGGTCTTGC CGTCCCTCGC CCAGGACTTT GGGGTGGCCA AGGGGGCTTT TCTCTTCCTG GCGTCCTTTG TCATCTCCTT CGGTCTGGTG AAAGGAGCCC TCAACCTGGT GGCGGGCTCC CTTTCCGATC GTGTCGGGCG TAAGCGTGTC CTGTTGATCG GCTGGATTGC CGGCATTCCC ATCCCGTTGC TGATCTTCTT TGCCGCCAAC TGGTGGTGGA TCGTCGCCGC CAACGTCTTT CTCGGCATCA ACCAGGCCTT CACCTGGACC ATGACGGTGA CCAGTCAGAT CGACTTGGCG GGCAGCCGAC AGCGCGGTCT GGCAGTGGGA ATCAATGAGG CGGTGGGTTA TTTGGGCATG GGCGTGGCGG GGCTGGCCAC GGGCTATCTG GCCGTGCTCT ATGGCCCCCG TTGGGCGTTG CTGCTCTTCG GCCTAGGGGT GGTCCTGCTG GCCCTGGTGC TGCTGTTACG CGTGCGCGAT ACCATCGCCT GGGTTCACGC CGAGCACGCC GCGGGCCCCA TATCCTCCCC CCCGCCAAAG CGGAGCTGGA TGCAGAGCTT TCTCGAAGTC TCTTTCCAGA ATCCGCGCTA CCGCGCCTTT TGCCAGGCGG GGGTGGCCAA CAAGGTGGCC GACACCCTCG TCTGGGTGCT CTTTCCGCTC TACTTCCTGG AGCACGCCAT GGGAGTGGTG GCCATCGGTT GGATCACCGG CGTTTACGGT GCCGTCTGGG GGCTTTCGCA ACTCTGGACC GGCTATCTGG CCGATCGCAT CGGCCGCAAG ATCCCCATTG TCAGCGGCTT TTTTCTGTTG TCTGCGGGCT TGGCGGCCAC TGCCTTGGTG CAAGGCTTTG TTTTGTGGAT GTCGACGGCG CTCATCATGG GTCTAGGCAT GGCGCTCCTG TACCCGAACC TGGTCGCCGC CATGTCCGAC ACGGCCCCAC CGCTGGAGCG AGGGCGTATC CTCGGTGTCT ATCGGTACTG GCGCGATACC GGTTATGCCA TCGGCGGATT GCTGCTGGGG CTGGTGGCGC AATGGAGTAA CGAAATTCTC CCCGCCGTCT GGGCTACGGC CGGTATTGTC GCCCTGTCGG GGCTGTGGGT GGCCCTGACC GTGAAAGAAA CCCATCCTCG TCCTGTTCAA AAAAAGGGTA ATGTATGA
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Protein sequence | MNPVQAAAGA YQRGIARNRG QFLLQTSQVF FVGLIIGMER TVLPSLAQDF GVAKGAFLFL ASFVISFGLV KGALNLVAGS LSDRVGRKRV LLIGWIAGIP IPLLIFFAAN WWWIVAANVF LGINQAFTWT MTVTSQIDLA GSRQRGLAVG INEAVGYLGM GVAGLATGYL AVLYGPRWAL LLFGLGVVLL ALVLLLRVRD TIAWVHAEHA AGPISSPPPK RSWMQSFLEV SFQNPRYRAF CQAGVANKVA DTLVWVLFPL YFLEHAMGVV AIGWITGVYG AVWGLSQLWT GYLADRIGRK IPIVSGFFLL SAGLAATALV QGFVLWMSTA LIMGLGMALL YPNLVAAMSD TAPPLERGRI LGVYRYWRDT GYAIGGLLLG LVAQWSNEIL PAVWATAGIV ALSGLWVALT VKETHPRPVQ KKGNV
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