Gene Lferr_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2047 
Symbol 
ID6878038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2050487 
End bp2051245 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID642789917 
Productputative transcriptional regulator 
Protein accessionYP_002220469 
Protein GI198284148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.289516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA CAAAAAAACA GCACGAAGCA TTTGCCAAAT TCTTTGAAAG CCCAACACGG 
AGCGCTCTTA GAGATTTGCT CAAAGGCAAC ATTGGCGAGA CAGACTACCT AGATTTCAAG
GAGACATGGC CTGAGCCAGT GAAGCTGGCA AAGCACATAT TGGCTATGGC AAATAGCGGT
GGGGGAGCAA TTGTTGTCGG CGTAAAGCAA TCCGAGGATA ACGCCGTCGA AGCTATAGGA
CTTGAGAAAT TGGAGGACAA ATCAGACATA AGTAAAAAGA TTGCCTCCTA CCTTCCTAGC
GAGATCGCTC TGGAAATCCT CGATTTCACT TACACCGAAT CTGAATATGA AAAGATACGA
GGAAAGTCAT TTCAGGTTAT GCTAGTTGAA TACAACCCAA AAATTGTTCC TCTGCTACCG
AAGAAGGAAG GGGATGGAAT AAGACGAAAT GCCGTTTATA TCAGAAAGGG CACTAACACG
GAGGAGGCCA ACTATGAAGA CTTACAGGAG CTAATTAACA AGCGCCTGGA AACTGGATAC
TCGACCCAAA AGAGCTTCGA ACTTTACAAA CACTTGGATC AACTAAAAGT TCTAGATATA
AATCAGCCAA GGAACAAGTC AAGGAAAGGC CGATTTTTCG GGGACATGCG AACTTTGGGG
GATATATTTG GCCCACACAA CAGTTTAGAG TACGACAAGT TTTTAGAGGG GCTGTATGAG
AAAAAGAAAA AAATCATCGA GCGCGAAATT GGGTTGTAA
 
Protein sequence
MALTKKQHEA FAKFFESPTR SALRDLLKGN IGETDYLDFK ETWPEPVKLA KHILAMANSG 
GGAIVVGVKQ SEDNAVEAIG LEKLEDKSDI SKKIASYLPS EIALEILDFT YTESEYEKIR
GKSFQVMLVE YNPKIVPLLP KKEGDGIRRN AVYIRKGTNT EEANYEDLQE LINKRLETGY
STQKSFELYK HLDQLKVLDI NQPRNKSRKG RFFGDMRTLG DIFGPHNSLE YDKFLEGLYE
KKKKIIEREI GL