Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2047 |
Symbol | |
ID | 6878038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2050487 |
End bp | 2051245 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642789917 |
Product | putative transcriptional regulator |
Protein accession | YP_002220469 |
Protein GI | 198284148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.289516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA CAAAAAAACA GCACGAAGCA TTTGCCAAAT TCTTTGAAAG CCCAACACGG AGCGCTCTTA GAGATTTGCT CAAAGGCAAC ATTGGCGAGA CAGACTACCT AGATTTCAAG GAGACATGGC CTGAGCCAGT GAAGCTGGCA AAGCACATAT TGGCTATGGC AAATAGCGGT GGGGGAGCAA TTGTTGTCGG CGTAAAGCAA TCCGAGGATA ACGCCGTCGA AGCTATAGGA CTTGAGAAAT TGGAGGACAA ATCAGACATA AGTAAAAAGA TTGCCTCCTA CCTTCCTAGC GAGATCGCTC TGGAAATCCT CGATTTCACT TACACCGAAT CTGAATATGA AAAGATACGA GGAAAGTCAT TTCAGGTTAT GCTAGTTGAA TACAACCCAA AAATTGTTCC TCTGCTACCG AAGAAGGAAG GGGATGGAAT AAGACGAAAT GCCGTTTATA TCAGAAAGGG CACTAACACG GAGGAGGCCA ACTATGAAGA CTTACAGGAG CTAATTAACA AGCGCCTGGA AACTGGATAC TCGACCCAAA AGAGCTTCGA ACTTTACAAA CACTTGGATC AACTAAAAGT TCTAGATATA AATCAGCCAA GGAACAAGTC AAGGAAAGGC CGATTTTTCG GGGACATGCG AACTTTGGGG GATATATTTG GCCCACACAA CAGTTTAGAG TACGACAAGT TTTTAGAGGG GCTGTATGAG AAAAAGAAAA AAATCATCGA GCGCGAAATT GGGTTGTAA
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Protein sequence | MALTKKQHEA FAKFFESPTR SALRDLLKGN IGETDYLDFK ETWPEPVKLA KHILAMANSG GGAIVVGVKQ SEDNAVEAIG LEKLEDKSDI SKKIASYLPS EIALEILDFT YTESEYEKIR GKSFQVMLVE YNPKIVPLLP KKEGDGIRRN AVYIRKGTNT EEANYEDLQE LINKRLETGY STQKSFELYK HLDQLKVLDI NQPRNKSRKG RFFGDMRTLG DIFGPHNSLE YDKFLEGLYE KKKKIIEREI GL
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