8 homologs were found in PanDaTox collection
for query gene Lferr_2047 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_2047  putative transcriptional regulator  100 
 
 		 252 aa  511  1e-144  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.289516  normal  1 
 
 
-
 
NC_011884  Cyan7425_4453  AAA-4 family protein  39.69 
 
 		 276 aa  145  5e-34  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0157  AAA ATPase  28.46 
 
 		 382 aa  44.7  0.002  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0620  putative transcriptional regulator  33.86 
 
 		 469 aa  43.5  0.003  Methanococcus maripaludis C5  Archaea  hitchhiker  0.00572222  n/a   
 
 
-
 
NC_009483  Gura_2922  putative transcriptional regulator  27.04 
 
 		 477 aa  42.4  0.007  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_1340  putative transcriptional regulator  24.84 
 
 		 519 aa  42.4  0.007  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011369  Rleg2_0182  putative transcriptional regulator  30.77 
 
 		 473 aa  42.4  0.008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.934205 
 
 
-
 
NC_014230  CA2559_00285  hypothetical protein  27.59 
 
 		 339 aa  42.4  0.008  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.464605  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>