| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1975 |
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| Symbol | |
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| ID | 6877963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1973431 |
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| End bp | 1974288 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789844 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_002220399 |
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| Protein GI | 198284078 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.438407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACTG AAGCCAGAGA GTTAGCGGGG TCAGATATTC CGGAGATGGG TCCGGTCACC
GATCCGCCGC CTCTGAGTGA TTTCGTGGAC GACGAAAATG GCGGGCCGTT TCTCAGCCAG
AAGCAGGAGC TGCAACTCAT CCGGCGCTTG CGTCGGGGTG ACGAGTGCGC CCGCGCCACA
CTGATCTCCG CGCACATGCC GTTGGTGCGG GCGGTCGCCA GGGGTTATCG CAATAAAGGA
CTCAGTCAGG AAGACCTCCT TCAGGAGGGT TACATGGGTC TACTGCGTGC CGTCGACCGC
TTTCAGGAAG GCCTCGGCAC ACGTTTCTCC AGTTATGCGA CCTGGTGGAT CCGGGAGGCT
ATGCAGCGGG CGCTCATCCG TTCCCGCTTC ATCCGCCTGC CCGATTACCT TGCCAAGTCC
CTGCACGCTT ATATGCAGAG CGGGGCGGAG GAAGACAGCG ACGCCGGTGT GCGCAGGGAG
CAGCGGCGTG AAGCCCTAGG GGTGCGCGAG AGCACCATGC GCGCCCTGGA TTTCGCCGAT
ATCCGCGTCT TCTCGCTCGA CGAGGAAATA TCCGACGGAC CGGGCCGCAT CGAACAGGTG
ACCGGCGACG TTGCCAGTCC GGACAGCGAC TATGACCGTG ATGCCATCTG CAAGGCACTG
CGGGAGCATC TGACCGAACT CAATGAAAAA CAGCGGGAGG TCATGGTCTT TCGCTACGGC
ATGCATGGTG ACGCGCCCAT GACCCTGGAA GCCGTCGCCG AGCGTATGGG CGTCAGTCGC
GAGGCGGTAA GACAGTTGCA GGTGCGGGCA CTGACCCGTC TGCGTCAGTC GTTGAGCGAG
AGCGGCTGGG GTTGCTGA
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| Protein sequence | MHTEARELAG SDIPEMGPVT DPPPLSDFVD DENGGPFLSQ KQELQLIRRL RRGDECARAT
LISAHMPLVR AVARGYRNKG LSQEDLLQEG YMGLLRAVDR FQEGLGTRFS SYATWWIREA
MQRALIRSRF IRLPDYLAKS LHAYMQSGAE EDSDAGVRRE QRREALGVRE STMRALDFAD
IRVFSLDEEI SDGPGRIEQV TGDVASPDSD YDRDAICKAL REHLTELNEK QREVMVFRYG
MHGDAPMTLE AVAERMGVSR EAVRQLQVRA LTRLRQSLSE SGWGC
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