| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1838 |
|---|
| Symbol | |
|---|
| ID | 6877822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1820261 |
|---|
| End bp | 1820761 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642789707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220266 |
|---|
| Protein GI | 198283945 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCGG AGGCCTGGCG CTTTATCGCC ATGGCCCTGG CCGAGCCCGC CGCCGACTCC
ACGGAGTTGA TCAGCGAACA ACCCTATCAG CCGGAGTGGT TGACCCCGGC CTTGGGGGAA
TTGGCCACAG TGGCCCTGGA CGCCTGGCAG GGTGAGCATA CCCGGCTGTT CACCTTCCCT
GCCGTCTGTC CGCCCTTCGC CTCCCCCTTC CTGGAGGACG GCATGCTGGA CGGTTACCGC
GCCGGCGAAC TGGAGCGTTT TTATGGCCAG TTTGATCTCG CCATTCAGGG ATTGCCTGCA
GATTACCTGG GTACCATGGC GGAGTTCATC GGCTTTTTTC TCGAAAAGGA CGACACGTCC
GCGGCGGCCG ATTTTTACCG GGAATACCTG GCGGACTGGC TGGATCGTTT CTGCGACTGC
CTGGAAGGGC ATGCCGAGTT CACGTTCTAT CGAGAGTTGG CTGGCGAAAT CCGCCGTCAG
GCTAGAGGAT TGCGCCCATG A
|
|---|
| Protein sequence | MYAEAWRFIA MALAEPAADS TELISEQPYQ PEWLTPALGE LATVALDAWQ GEHTRLFTFP
AVCPPFASPF LEDGMLDGYR AGELERFYGQ FDLAIQGLPA DYLGTMAEFI GFFLEKDDTS
AAADFYREYL ADWLDRFCDC LEGHAEFTFY RELAGEIRRQ ARGLRP
|
|---|
| |