| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1780 |
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| Symbol | |
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| ID | 6877762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1760148 |
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| End bp | 1761308 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789648 |
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| Product | hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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| Protein accession | YP_002220208 |
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| Protein GI | 198283887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTGGT GGATAGGCGG CCCTGCGGCC CTGCTTTCCC TGGCGGCCGT GGTCTATCTG
CTGTTGGCGC TTCGAGCAAT CGCGCGCTGG CATCCGGTAT TGCCGGAGCG CGATGCCGCC
GTCAGCGGAG ATATCCTGTG CGACGGGCCC GGGGTCAGTG TGCTCAAGCC CCTGCATGGG
GACGAGGGGG ATCTCTACGC CGCCTTGCGC AGTTTCTGCG TGCAGGACTA CCCGGCATTT
GAAATCGTTT TTGGCGTGCA GCGCCCCGAC GATCCTGCCG TCACCGTGGT GCAGCGGCTG
CAGGCCGAGT TCCCGGCCCT GGCGTTGCGC TGGGTGTGTA CGGAAGCGCG TATCGGCAGT
AATCCCAAGG TCAATAATCT GGCGGGTATC CTCGCGCTCT GTCGTTACGA CACCCTGGTG
ATCAGCGACG CGGATATTTC CGTCGGCCCC CATTACTTGC GCCAGATCTG TGCTTCCCTG
CAAAACAGGG ATGTGGGGGT GGTGACCTGC CTCTATCGGG CCAGGCCCGT AGCCACCTTC
TGGTCGCGGG TGCTGGCCGG TCAGGTGAAC GGTCTCTTTC TGCCCTCGGT GCTGCTGGCG
GCGCGCCTGG GTCCGAACAT TTTCTGCGGC GGGGCGACCA TGGCCCTGCG TCGCCCGACG
CTGGCGGCCA TCGGCGGCCT GCCACGCCTG GCAAACCAAC TGGCTGACGA TTACTGGCTC
GGCGCCTACA GCCGCCAGTT GGGGCAAGCC ACCCTGCTCG CGGATTATGT GGTGGACACC
GAGGTCCGGG AGGCGAATTT CCGCGCCTTT TACCAGCATG CGCTGCGCTG GTCGCGTACC
ACGCGATCGG TACAGCCGCT GGGCCACACC TTTTCCTTTT TGACTTATCC GCTGCCCCTG
GTGCTGCTGC TCGCGCCCTG GATGGGTCTC TGGGGCGGGG TGCCGCTGGG TGTGGTTCTC
CTCTTGCGCC TCGTGTACCA TAGGCAAATT ATGCACAAAC TTAGTGCAGA CGGTTCGTTT
GGTGTGGCCC TGCTGGGAGA GTTTCTGGGC CTGTGGATCT GGTTTCACGC CCTTTTCGCA
CGGCACGTTG CCTGGCGGGG GTCGCAATTT GCCATCGGCG CCGACGGGCG GATGGATGGC
CATGACGGAG CAAAACGATG A
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| Protein sequence | MCWWIGGPAA LLSLAAVVYL LLALRAIARW HPVLPERDAA VSGDILCDGP GVSVLKPLHG
DEGDLYAALR SFCVQDYPAF EIVFGVQRPD DPAVTVVQRL QAEFPALALR WVCTEARIGS
NPKVNNLAGI LALCRYDTLV ISDADISVGP HYLRQICASL QNRDVGVVTC LYRARPVATF
WSRVLAGQVN GLFLPSVLLA ARLGPNIFCG GATMALRRPT LAAIGGLPRL ANQLADDYWL
GAYSRQLGQA TLLADYVVDT EVREANFRAF YQHALRWSRT TRSVQPLGHT FSFLTYPLPL
VLLLAPWMGL WGGVPLGVVL LLRLVYHRQI MHKLSADGSF GVALLGEFLG LWIWFHALFA
RHVAWRGSQF AIGADGRMDG HDGAKR
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