Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1577 |
Symbol | |
ID | 6877553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1540949 |
End bp | 1541833 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789441 |
Product | ribonuclease BN |
Protein accession | YP_002220006 |
Protein GI | 198283685 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.274703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.013095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGA GGAAAATGCC CGTGCGCCGG TGCTTTCGTC AGAAGAATCA AGCGCTGCAC CCGGTCCCCG CAGAGCAAAA CGGTTGCTGG CAGCGTATGT TCTACCGGAT ATTCAGAGCA TGGCACGGTT TCTGGAACGA TGACTGTATC GACCGCGCGG GGTTGCTGGC GTATACCACG CTTTTTGGCC TGATACCTTT GGCGGTGCTC GGATTCAGCC TGTGGAACCT GGTAGGATTC AGTCTGCTCC ACCGCGCTCA GGTTGATGAT CTGGTTTTAC GCAGTTTTGT CCCCCAAACT GGAGGGGCGA TTCTGCGTCA GGTAAACAGC ATCGCGGCGC GTGGCGCGCA AATGGGTTTG TTTGGGTTGC TGGGATTGGG CATCACCGCG ATTTTGCTGC TGCATGCGGT GGAGCGGCAT TTTAACGCCA TCTGGGGGGT CACGCCGACC TGCCTGTGGT GCCGTATTTT GCGTTACATG GCGATGCTTG TGGCCGGTCC GCTCGGTATC GCGCTCATTC TGCCTCTCTT GGGCCCCCTG CAACCCCTGC TGGTCTACCT GGCGCATATT CCTCTTCTGC CCCCCGTTCT GAGCCATGTA CTCACCTTTC TAGTGGTTAC AGTGATGATG GGGCTACTCT ACAAAATACT GCCCTCAGCG CCCACGCGCT GGCAGGATGT TTTTCTCGGC GGTGTGTCCA CAGCCATTCT GTTTGAGATT TCAAAGATGG TGCTGGCTGG TTACCTGCAA TTTTCAACCT TCGAAACTCT ATATGGTGCA CTCGGCGCTT TTCCCGTATT TCTCCTCTGG TTGTACATGG CCTGGGCGAG CGTTCTGTTT GGCGCCGAAA TGGCAGCGGC TGGAATGACG CATGGTGACC ATTAG
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Protein sequence | MTARKMPVRR CFRQKNQALH PVPAEQNGCW QRMFYRIFRA WHGFWNDDCI DRAGLLAYTT LFGLIPLAVL GFSLWNLVGF SLLHRAQVDD LVLRSFVPQT GGAILRQVNS IAARGAQMGL FGLLGLGITA ILLLHAVERH FNAIWGVTPT CLWCRILRYM AMLVAGPLGI ALILPLLGPL QPLLVYLAHI PLLPPVLSHV LTFLVVTVMM GLLYKILPSA PTRWQDVFLG GVSTAILFEI SKMVLAGYLQ FSTFETLYGA LGAFPVFLLW LYMAWASVLF GAEMAAAGMT HGDH
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