Gene Lferr_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1467 
Symbol 
ID6877441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1425552 
End bp1426373 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID642789338 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_002219905 
Protein GI198283584 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CGACTGCTGA ATCCGGCGCG TCGGCTGCAC CCGTACAGGT TCACGGGCAG 
TCACGGGCAG ACCTACCGGA CGGCCTCTTC GTTCCGCCGG ATGCTCTGGA GCTGTTGCTG
GAAAGCTTCT CCGGCCCGTT GGAGCTGCTG CTCTGGCTCA TCCGCCGTAA CCGCATGGAT
ATCCGCGATA TTCCCGTAGC CGAAGTGACC CGCCAGTACC TGCATTACCT GCACGAGGCG
CGTCGCCGCA ATCTGGAACT CGCGGCGGAA TATCTGGTGA TGGCCGCCTG GCTGGCGGAG
ATCAAGGCGC GCATGCTGCT GCCGGTGCCT CCGACTGGAG ATGATACGGA TTTTGATCCC
CGGCAGGAGC TGGCGCGCCG CCTGGAAGCC CTGGCTATGG TGCAGGGTCA GGCTGCGGCG
CTCCGCGGCC TGTCCCAGGC CGGTCGGGAT TTCTGGCCGG TCTGCCCTGC GATACATCCC
GATCCGTTCC CCGCACCTCC TCCAGTGTCT CTCACCGATC TGGCGAATGC CTGGCGGGCT
TTGCTGGGGC GCCCGCCCCG CAGACTGGCT CCCGCCCATA CCCTGGTACA CCCGCATATG
GGACTACGGC AGCGGATGGT GGAGGTGCTG TTGCTTTGTC GGCGGGAGTC GCGTCCCTGG
TATCTCCATG AGCTTCTGCC GCTTGGGGCG GATCGCCTGG CTCTGGCCGT GTCCCTGTTG
GCGGTGCTGG AGTTGCTCCG GCAGCGGGCA TTGGCCCTGG TTGGAAATGA AGATGTGGGC
TGGCAGATCG TTGTGGCGGC GGCGCAGGTC TTTGGCGACT GA
 
Protein sequence
MSVTTAESGA SAAPVQVHGQ SRADLPDGLF VPPDALELLL ESFSGPLELL LWLIRRNRMD 
IRDIPVAEVT RQYLHYLHEA RRRNLELAAE YLVMAAWLAE IKARMLLPVP PTGDDTDFDP
RQELARRLEA LAMVQGQAAA LRGLSQAGRD FWPVCPAIHP DPFPAPPPVS LTDLANAWRA
LLGRPPRRLA PAHTLVHPHM GLRQRMVEVL LLCRRESRPW YLHELLPLGA DRLALAVSLL
AVLELLRQRA LALVGNEDVG WQIVVAAAQV FGD