Gene Lferr_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1327 
Symbol 
ID6877301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1285415 
End bp1285762 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content59% 
IMG OID642789201 
ProductIS66 Orf2 family protein 
Protein accessionYP_002219768 
Protein GI198283447 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0268253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTAA ATTCGAGCAG CCGGATCTGG CTCGCGGCAG CGCCCGTAGA TATGCGGTTA 
GGCTTTGATG GCCTGGCGGC CAAGGTACAG GGGGTATTGG CTGCCGATCC TTTTTGCGGT
CATGCTTTTG TCTTTCGCAA CCGCCGAGGG GATCGTCTGA AATTGTTACT GTGGGATGGA
CTGGGCTTCT GGCTGGTGTA TCGCCGTCTG GATCAGGGAC GACTCCATTG GCCCCGCGCC
GATGCCGGTG CCATAGAACT CTCCGCTGCG CAGTGGGCGA TGCTGGTAGA GGGGCGCCCG
TGGACGCCGT TACCGAGCCT GGAAAAATGC ACACCAACAC TGCTGTAA
 
Protein sequence
MWLNSSSRIW LAAAPVDMRL GFDGLAAKVQ GVLAADPFCG HAFVFRNRRG DRLKLLLWDG 
LGFWLVYRRL DQGRLHWPRA DAGAIELSAA QWAMLVEGRP WTPLPSLEKC TPTLL