| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1198 |
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| Symbol | |
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| ID | 6877171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1167986 |
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| End bp | 1170250 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789075 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002219643 |
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| Protein GI | 198283322 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00211844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCATT TTGCGCGCAC TGCATTATAT ATGTCCGTAG CCAGCGTTTT GGCCTGCGTC
CCGTCCGCCG ACGCCGATAG CGCCCTGCCA AAACTCGGCA CCGTGACCGT GGAGGGACAT
CAGAAAAACA CCCTGGAAAA CCCTGCGAGC GGCGCTGAGC AGGGGGCCAC CATCAGCGGC
CATGCATTGG ACATTCTCGG TGGAGCAGGG CAGACCAATC CGTACGCCGC CGTCTCCCTT
CTGCCGTCGG TCATGGCCCA GAACCCGGAT CCCTACGGTC TGGCCAACGT GCCAGGCGGC
AACAAGGGTA TACGCATCCG GGGGGAGCGC AATCCCCACG GAGGGATCGG CACGGTAGAG
GGGTTACCCC TGTCCGCCGT CAACCCCGGC CCCGGCGAAC AGTTTCTGTT CGACATGGAA
AACATCCGCA GTGTCACGCT GTTGTCAGCG CCCTTCCCGT CGGACAAACT GGCCGTATTC
ACCACCCAGG GCTATCTCAA CAGCAATGTG CTCTGGCCCA GGGCCAAGTT TGGCGGCGAA
GTGGATCAGA GCTTTGGATC CTATAATTTT CATCGCAGCT TCATCCGGCT GGACTCGGGT
ACCTTGCCTA CCGGCACCCG CGTCTTCATC TCCGGATCCT ATACCCATGC GGATCAGTGG
CGCGGCCCGG GCGCATCACC GGACTATCGC TATAACGGTG AGATCGGCAT CAGCCAGGAT
TTAGGCCGTA CCCTGAGCGC CAAGGTTTAT GCAGCCTACG GTTCCATGAA GGAGAATAAT
TATCTGCCTC TGACGTATAC CCAGGCCAGC AATCTGGGGC AGTACTACAA CCTCGGCTAT
AACAGCGCAC TCACCGGGAA TGCCGCCAAC GACGTGAATT ATTACGGATA TAACCGGCAG
AAATTCCAGG ATTACGCGGT ATTCGGGGAA CTCAACTGGC ATCCCGATGA TCAGAACACG
CTCGTTATCA AGCCCTTCTA CAGCCAGGAA AACGGCTATT ACCTGCAGGG GTTGGATAAC
CTCGGGGGTA AACCAGGTTT GCGAGATTGG GTCATCGACC ATTCTCTCTA TGGCGTGGTG
GCCCAATACG ACACCCAATG GAATGGTAAT CACTTTTCAG TTGGTTACTG GTTTGAAAAT
CTAACTCCTC CCGGACCCCC CACGGATTTC AAGATTTATC GTCTGGTCAA CGGCCAGCCC
GTTTTTGGCG GTTATGGCCT CTTGGCACGC GCTACGGCGG ACCACGTCTT CAACAGTCCC
TATTTCCAAT GGCGGCGGAG GGTCGGTCCC GTAACGTTTA CGGCAGGCGC TCGTTATCTG
ATGGAGCAAA CGCCGTCCTT CAGCGTCTAC AATACCGCGG GGATTCCTGA CGCATCCTAT
GCCAATGCCT TGAATCTGGC CACCTCCATC AATCCAGCCC GCAGTGTGGA GGGTAGAACC
TTCTACCAAT GGCTACCTTA TTTTTCGGCG GTTTATGCAG TCAACCCAGA CCTGGATGCG
GTCTTTGCCT ATGGTCGCAA TAATGGTGCT CCCGCCTTCA ACAATTGGCC CTCCGTACAA
ATGAACATTG CTGCTTTTCA AAAGGCTGGG GTGACCGCGC AGCGTGCCTG GGATCAACTG
GCGCCGGAAA CCTCCAACAG CTTCAGTCTG GGGCTCAAAT GGCACGAAGC GGCGTGGTAT
GTGAATCCCA CCTTTTTTTA CGCCACCTAT CGCAATAAAT ACGTGAATGC CTACGACCCT
TTGGTGGGTA TCAGCTATGA TCAGAACGCG GGCGTGGGTC GCGCCTGGGG CTTTGAACTG
GCGGCCGGAG CCAAGCTCTG GCATCGGCTG TCCGTGTTCA GTAACTTGGC CTATGACCGC
GCCTATTTCA CTCAGGATCT GCGTACCGGC AGTGGCGCTT TCTTGCCCGT CACTGGCTTG
CAGTTTCCTG ACACGCCACG CTTCATTGGT AGTCTGGGTG CATTATACGA ATATGGCCGG
TTCAGTATTG CGCCCACATT GCAGTATATG GGGAGCCGCT ATGCGGATAC CCTGCATACC
CAACCCTTGC CGGGCTATCT GCTGGCCAAC CTGAACATGG GTTATCACCG GCGGATTACC
CATGTGGGCG AGCTGACTGT GAATCTGAGT ATCCTGAACC TCTTTAACCG CCACTATATC
GGCCTCATCG ACAGCAGCTA TTTCAGCACC GCGGCATCTG GCGGTGCCAG TTTCTATCCC
GGCGCGCCCA TCACCGTCGC CGGGACGATA GGGCTACGTT TTTAG
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| Protein sequence | MQHFARTALY MSVASVLACV PSADADSALP KLGTVTVEGH QKNTLENPAS GAEQGATISG
HALDILGGAG QTNPYAAVSL LPSVMAQNPD PYGLANVPGG NKGIRIRGER NPHGGIGTVE
GLPLSAVNPG PGEQFLFDME NIRSVTLLSA PFPSDKLAVF TTQGYLNSNV LWPRAKFGGE
VDQSFGSYNF HRSFIRLDSG TLPTGTRVFI SGSYTHADQW RGPGASPDYR YNGEIGISQD
LGRTLSAKVY AAYGSMKENN YLPLTYTQAS NLGQYYNLGY NSALTGNAAN DVNYYGYNRQ
KFQDYAVFGE LNWHPDDQNT LVIKPFYSQE NGYYLQGLDN LGGKPGLRDW VIDHSLYGVV
AQYDTQWNGN HFSVGYWFEN LTPPGPPTDF KIYRLVNGQP VFGGYGLLAR ATADHVFNSP
YFQWRRRVGP VTFTAGARYL MEQTPSFSVY NTAGIPDASY ANALNLATSI NPARSVEGRT
FYQWLPYFSA VYAVNPDLDA VFAYGRNNGA PAFNNWPSVQ MNIAAFQKAG VTAQRAWDQL
APETSNSFSL GLKWHEAAWY VNPTFFYATY RNKYVNAYDP LVGISYDQNA GVGRAWGFEL
AAGAKLWHRL SVFSNLAYDR AYFTQDLRTG SGAFLPVTGL QFPDTPRFIG SLGALYEYGR
FSIAPTLQYM GSRYADTLHT QPLPGYLLAN LNMGYHRRIT HVGELTVNLS ILNLFNRHYI
GLIDSSYFST AASGGASFYP GAPITVAGTI GLRF
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